RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ACSL6Q9UKU0 697 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.06□□□□□ -1.44
SSR1-209ENST00000488834 PRODHO43272 600 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 MYO1BO43795 1136 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 FARP2O94887 1054 aaPredicted RBP6.06□□□□□ -1.44
SSR1-209ENST00000488834 GRIA2P42262 883 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 TXKP42681 527 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 GFRA1P56159 465 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 BMS1Q14692 1282 aaKnown RBP6.06□□□□□ -1.44
SSR1-209ENST00000488834 SF1Q15637 639 aaKnown RBP6.06□□□□□ -1.44
SSR1-209ENST00000488834 NFE2L2Q16236 605 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 PRSS53Q2L4Q9 553 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 OLFML2BQ68BL8 750 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 TMEM132EQ6IEE7 984 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 LRP10Q7Z4F1 713 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 ZNF605Q86T29 641 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 PPIL6Q8IXY8 311 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 ZNF669Q96BR6 464 aaPredicted RBP6.06□□□□□ -1.44
SSR1-209ENST00000488834 SHISA4Q96DD7 197 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 ZSWIM4Q9H7M6 989 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 PDLIM7Q9NR12 457 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.06□□□□□ -1.44
SSR1-209ENST00000488834 GULP1Q9UBP9 304 aa6.06□□□□□ -1.44
SSR1-209ENST00000488834 DBR1Q9UK59 544 aaKnown RBP6.06□□□□□ -1.44
SSR1-209ENST00000488834 NUDT19A8MXV4 375 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 CORO7P57737 925 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 MVKQ03426 396 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 TMEM62Q0P6H9 643 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 KCNAB2Q13303 367 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 RAB3GAP1Q15042 981 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 PKN1Q16512 942 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 E4F1Q66K89 784 aaPredicted RBP6.05□□□□□ -1.44
SSR1-209ENST00000488834 NSMFQ6X4W1 530 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 LZTR1Q8N653 840 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 TMEM145Q8NBT3 493 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 FRS2Q8WU20 508 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 DIO2Q92813 273 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 MRFAP1L1Q96HT8 127 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 CHAMP1Q96JM3 812 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 GOLGA2P5Q9HBQ8 144 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 RWDD3Q9Y3V2 267 aa6.05□□□□□ -1.44
SSR1-209ENST00000488834 KDM2BQ8NHM5 1336 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 FAM221BA6H8Z2 402 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 EFEMP2O95967 443 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 SCG5P05408 212 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 MSL3P1P0C860 447 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 RASA3Q14644 834 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 USP53Q70EK8 1073 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 FBXO15Q8NCQ5 510 aaPredicted RBP6.04□□□□□ -1.44
SSR1-209ENST00000488834 NPLOC4Q8TAT6 608 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 MKL1Q969V6 931 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 MMP19Q99542 508 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 DNAJC7Q99615 494 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 ARHGEF4Q9NR80 690 aa6.04□□□□□ -1.44
SSR1-209ENST00000488834 C7orf72A4D263 438 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 ABLIM1O14639 778 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 DIAPH1O60610 1272 aaKnown RBP6.03□□□□□ -1.44
SSR1-209ENST00000488834 FUCA1P04066 466 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 FGFR1P11362 822 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 PABPC1P11940 636 aaKnown RBP6.03□□□□□ -1.44
SSR1-209ENST00000488834 LTBRP36941 435 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 CEBPAP49715 358 aaPredicted RBP6.03□□□□□ -1.44
SSR1-209ENST00000488834 RPL11P62913 178 aaKnown RBP6.03□□□□□ -1.44
SSR1-209ENST00000488834 MAP4K2Q12851 820 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 NLGN2Q8NFZ4 835 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 SLC26A8Q96RN1 970 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 MARCH2Q9P0N8 246 aa6.03□□□□□ -1.44
SSR1-209ENST00000488834 CDK11AQ9UQ88 783 aaPredicted RBP6.03□□□□□ -1.44
SSR1-209ENST00000488834 TIMM13Q9Y5L4 95 aaPredicted RBP6.03□□□□□ -1.44
SSR1-209ENST00000488834 GTF2A2P52657 109 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 ERVFRD-1P60508 538 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 NR1I3Q14994 352 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 INF2Q27J81 1249 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 CCDC144BQ3MJ40 725 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 ZNF648Q5T619 568 aaPredicted RBP6.02□□□□□ -1.45
SSR1-209ENST00000488834 ACBD5Q5T8D3 534 aaPredicted RBP6.02□□□□□ -1.45
SSR1-209ENST00000488834 YOD1Q5VVQ6 348 aaPredicted RBP6.02□□□□□ -1.45
SSR1-209ENST00000488834 DPH6Q7L8W6 267 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 FAM84AQ96KN4 292 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 LNPKQ9C0E8 428 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 KCNK12Q9HB15 430 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 SIRT5Q9NXA8 310 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 PCDHA2Q9Y5H9 948 aa6.02□□□□□ -1.45
SSR1-209ENST00000488834 TRBV23-1A0A0A0MS06 115 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 DLX3O60479 287 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 CYBBP04839 570 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 TMEM253P0C7T8 217 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 SRSF3P84103 164 aaKnown RBP6.01□□□□□ -1.45
SSR1-209ENST00000488834 CYP4F3Q08477 520 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 SLC35F1Q5T1Q4 408 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 MBLAC2Q68D91 279 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 PAQR3Q6TCH7 311 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 SYDE1Q6ZW31 735 aaPredicted RBP6.01□□□□□ -1.45
SSR1-209ENST00000488834 TEX2Q8IWB9 1127 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 SCUBE1Q8IWY4 988 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 ZBTB38Q8NAP3 1195 aaPredicted RBP6.01□□□□□ -1.45
SSR1-209ENST00000488834 KREMEN2Q8NCW0 462 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 KCNN1Q92952 543 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 TRMT2BQ96GJ1 504 aaKnown RBP6.01□□□□□ -1.45
SSR1-209ENST00000488834 TMEM169Q96HH4 297 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms