RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 KIAA1211Q6ZU35 1233 aa22.86■■□□□ 1.25
R3HDM1-215ENST00000483021 TMEM199Q8N511 208 aa22.86■■□□□ 1.25
R3HDM1-215ENST00000483021 SLC43A3Q8NBI5 491 aa22.86■■□□□ 1.25
R3HDM1-215ENST00000483021 PURBQ96QR8 312 aaKnown RBP22.86■■□□□ 1.25
R3HDM1-215ENST00000483021 DSCC1Q9BVC3 393 aa22.86■■□□□ 1.25
R3HDM1-215ENST00000483021 SEMA6BQ9H3T3 888 aa22.86■■□□□ 1.25
R3HDM1-215ENST00000483021 DDX49Q9Y6V7 483 aaKnown RBP22.86■■□□□ 1.25
R3HDM1-215ENST00000483021 DLL1O00548 723 aa22.85■■□□□ 1.25
R3HDM1-215ENST00000483021 DUSP28Q4G0W2 176 aa22.85■■□□□ 1.25
R3HDM1-215ENST00000483021 SLC30A10Q6XR72 485 aa22.85■■□□□ 1.25
R3HDM1-215ENST00000483021 CLEC4DQ8WXI8 215 aa22.85■■□□□ 1.25
R3HDM1-215ENST00000483021 CD4P01730 458 aa22.84■■□□□ 1.25
R3HDM1-215ENST00000483021 CALML3P27482 149 aa22.84■■□□□ 1.25
R3HDM1-215ENST00000483021 ITGA7Q13683 1181 aa22.84■■□□□ 1.25
R3HDM1-215ENST00000483021 IMMTQ16891 758 aaKnown RBP22.84■■□□□ 1.25
R3HDM1-215ENST00000483021 CDX2Q99626 313 aaPredicted RBP22.84■■□□□ 1.25
R3HDM1-215ENST00000483021 ZKSCAN3Q9BRR0 538 aa22.84■■□□□ 1.25
R3HDM1-215ENST00000483021 CTNNA3Q9UI47 895 aa22.84■■□□□ 1.25
R3HDM1-215ENST00000483021 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 B4DLN1 442 aa22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 KDM4AO75164 1064 aa22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 MRPL12P52815 198 aaKnown RBP22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 PSRC1Q6PGN9 363 aaPredicted RBP22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 PNMA1Q8ND90 353 aa22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 DNERQ8NFT8 737 aa22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 WDR11Q9BZH6 1224 aa22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 PPP1R12CQ9BZL4 782 aa22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 MAF1Q9H063 256 aa22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 TTYH1Q9H313 450 aaPredicted RBP22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 KAT14Q9H8E8 782 aa22.83■■□□□ 1.25
R3HDM1-215ENST00000483021 RBM47A0AV96 593 aaKnown RBP22.82■■□□□ 1.24
R3HDM1-215ENST00000483021 RPS6P62753 249 aaKnown RBP22.82■■□□□ 1.24
R3HDM1-215ENST00000483021 ANKS1AQ92625 1134 aa22.82■■□□□ 1.24
R3HDM1-215ENST00000483021 POLR3EQ9NVU0 708 aa22.82■■□□□ 1.24
R3HDM1-215ENST00000483021 GOLGA8HP0CJ92 632 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 CSF2RAP15509 400 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 PTGS1P23219 599 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 CPT1AP50416 773 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 PDE4DQ08499 809 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 ASPRV1Q53RT3 343 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 ZSCAN10Q96SZ4 725 aaPredicted RBP22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 KRT23Q9C075 422 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 CNNM2Q9H8M5 875 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 RAD50Q92878 1312 aa22.81■■□□□ 1.24
R3HDM1-215ENST00000483021 B4E1Z4 1266 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 NKRFO15226 690 aaKnown RBP eCLIP22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 EDNRBP24530 442 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 DNAJB2P25686 324 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 PPP2R5BQ15173 497 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 USH1GQ495M9 461 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 BRDTQ58F21 947 aaPredicted RBP22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 TMEM240Q5SV17 173 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 TMEM63BQ5T3F8 832 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 RGS22Q8NE09 1264 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 HIPK3Q9H422 1215 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 GRIN2DO15399 1336 aa22.8■■□□□ 1.24
R3HDM1-215ENST00000483021 PRUNE2Q8WUY3 3088 aa22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 CDC37Q16543 378 aaPredicted RBP22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 RASIP1Q5U651 963 aa22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 ENAHQ8N8S7 591 aaPredicted RBP22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 SCFD2Q8WU76 684 aa22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 IL23AQ9NPF7 189 aa22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 SCN10AQ9Y5Y9 1956 aa22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 TNKSO95271 1327 aa22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 ABCB11O95342 1321 aa22.79■■□□□ 1.24
R3HDM1-215ENST00000483021 B4GALT4O60513 344 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 CYP2C18P33260 490 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 C16orf59Q7L2K0 433 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 OR6J1Q8NGC5 347 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 MYLIPQ8WY64 445 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 UBAC1Q9BSL1 405 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 UBA5Q9GZZ9 404 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 MTIF3Q9H2K0 278 aaKnown RBP22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 ZSWIM5Q9P217 1185 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 KIAA1217Q5T5P2 1943 aa22.78■■□□□ 1.24
R3HDM1-215ENST00000483021 PARP1P09874 1014 aaKnown RBP22.77■■□□□ 1.24
R3HDM1-215ENST00000483021 PSMC6P62333 389 aa22.77■■□□□ 1.24
R3HDM1-215ENST00000483021 PURAQ00577 322 aaKnown RBP22.77■■□□□ 1.24
R3HDM1-215ENST00000483021 MAFAQ8NHW3 353 aaPredicted RBP22.77■■□□□ 1.24
R3HDM1-215ENST00000483021 CPVLQ9H3G5 476 aa22.77■■□□□ 1.24
R3HDM1-215ENST00000483021 GPHNQ9NQX3 736 aaPredicted RBP22.77■■□□□ 1.24
R3HDM1-215ENST00000483021 ACRP10323 421 aa22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 FOSL2P15408 326 aa22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 ZNF365Q70YC5 407 aa22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 MCF2L2Q86YR7 1114 aa22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 ADGRF4Q8IZF3 695 aa22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 TIFAQ96CG3 184 aa22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 MTG1Q9BT17 334 aaPredicted RBP22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 NOC4LQ9BVI4 516 aaKnown RBP22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 TRPV6Q9H1D0 765 aa22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 ALDH8A1Q9H2A2 487 aaPredicted RBP22.76■■□□□ 1.23
R3HDM1-215ENST00000483021 CHD9Q3L8U1 2897 aa22.75■■□□□ 1.23
R3HDM1-215ENST00000483021 DHX16O60231 1041 aaKnown RBP22.75■■□□□ 1.23
R3HDM1-215ENST00000483021 KPNA6O60684 536 aa22.75■■□□□ 1.23
R3HDM1-215ENST00000483021 MYL3P08590 195 aa22.75■■□□□ 1.23
R3HDM1-215ENST00000483021 SUPT20HL2P0C7V6 817 aa22.75■■□□□ 1.23
R3HDM1-215ENST00000483021 TTLL4Q14679 1199 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms