RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PAX3P23760 479 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 CCND1P24385 295 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 PURAQ00577 322 aaKnown RBP6.85□□□□□ -1.31
COPA-203ENST00000481040 AMPD2Q01433 879 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 NRG1Q02297 640 aaPredicted RBP6.85□□□□□ -1.31
COPA-203ENST00000481040 CYP4F3Q08477 520 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 ATP13A4Q4VNC1 1196 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 DYMQ7RTS9 669 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 MTDHQ86UE4 582 aaKnown RBP6.85□□□□□ -1.31
COPA-203ENST00000481040 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.85□□□□□ -1.31
COPA-203ENST00000481040 DCAF11Q8TEB1 546 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 FUBP3Q96I24 572 aaKnown RBP eCLIP6.85□□□□□ -1.31
COPA-203ENST00000481040 FBXL18Q96ME1 805 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 ZDHHC15Q96MV8 337 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 ASPNQ9BXN1 380 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 GSX1Q9H4S2 264 aaPredicted RBP6.85□□□□□ -1.31
COPA-203ENST00000481040 CYP4F12Q9HCS2 524 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 TCF7L1Q9HCS4 588 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 PCDHA8Q9Y5H6 950 aa6.85□□□□□ -1.31
COPA-203ENST00000481040 DLL1O00548 723 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 GAS7O60861 476 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 PPFIA4O75335 1185 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 SNUPNO95149 360 aaKnown RBP6.84□□□□□ -1.31
COPA-203ENST00000481040 IARSP41252 1262 aaKnown RBP6.84□□□□□ -1.31
COPA-203ENST00000481040 ASPAP45381 313 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 LSSP48449 732 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 ERVK-21P61565 698 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 RAC1P63000 192 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 SOX4Q06945 474 aaPredicted RBP6.84□□□□□ -1.31
COPA-203ENST00000481040 FAPQ12884 760 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 RALBP1Q15311 655 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 INAVAQ3KP66 663 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 SMYD4Q8IYR2 804 aaPredicted RBP6.84□□□□□ -1.31
COPA-203ENST00000481040 IGSF22Q8N9C0 903 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 KREMEN2Q8NCW0 462 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 SMG8Q8ND04 991 aaKnown RBP6.84□□□□□ -1.31
COPA-203ENST00000481040 GPR101Q96P66 508 aaPredicted RBP6.84□□□□□ -1.31
COPA-203ENST00000481040 SLC13A1Q9BZW2 595 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 PRDM14Q9GZV8 571 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 SUGCTQ9HAC7 445 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 PRR13Q9NZ81 148 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 PCOLCE2Q9UKZ9 415 aa6.84□□□□□ -1.31
COPA-203ENST00000481040 SF3B6Q9Y3B4 125 aaKnown RBP6.84□□□□□ -1.31
COPA-203ENST00000481040 ULK1O75385 1050 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 WISP1O95388 367 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 MT-CO1P00395 513 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 TRIM27P14373 513 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 ITIH2P19823 946 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 PDE6BP35913 854 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 SCRN1Q12765 414 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 DPY19L1Q2PZI1 675 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 LETMD1Q6P1Q0 360 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 C11orf96Q7Z7L8 435 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 CDH24Q86UP0 819 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 RNF141Q8WVD5 230 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 MIPEPQ99797 713 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 ZFYVE21Q9BQ24 234 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 RNF208Q9H0X6 261 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 VTA1Q9NP79 307 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 PRDM11Q9NQV5 511 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 BSDC1Q9NW68 430 aaPredicted RBP6.83□□□□□ -1.32
COPA-203ENST00000481040 GFOD1Q9NXC2 390 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 PNMA8BQ9ULN7 279 aaPredicted RBP6.83□□□□□ -1.32
COPA-203ENST00000481040 ANKRD6Q9Y2G4 727 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
COPA-203ENST00000481040 WDR64B1ANS9 1081 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 FZD9O00144 591 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 ARVCFO00192 962 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 TRAF5O00463 557 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 SH3BP5O60239 455 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 PF4V1P10720 104 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 DRD2P14416 443 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 ETV3P41162 512 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 GPR85P60893 370 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 SNW1Q13573 536 aaKnown RBP6.82□□□□□ -1.32
COPA-203ENST00000481040 ZRSR2Q15696 482 aaKnown RBP6.82□□□□□ -1.32
COPA-203ENST00000481040 MINDY4Q4G0A6 757 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 C10orf62Q5T681 223 aaPredicted RBP6.82□□□□□ -1.32
COPA-203ENST00000481040 RSPO2Q6UXX9 243 aaPredicted RBP6.82□□□□□ -1.32
COPA-203ENST00000481040 KIAA1211Q6ZU35 1233 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 TICAM2Q86XR7 235 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
COPA-203ENST00000481040 PPIL6Q8IXY8 311 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 IFNL3Q8IZI9 196 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 CPA6Q8N4T0 437 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 DTWD1Q8N5C7 304 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 USP33Q8TEY7 942 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 TIFAQ96CG3 184 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 AHCYL2Q96HN2 611 aaKnown RBP6.82□□□□□ -1.32
COPA-203ENST00000481040 DSCC1Q9BVC3 393 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 PHF20Q9BVI0 1012 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 CABP5Q9NP86 173 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 SPTLC3Q9NUV7 552 aa6.82□□□□□ -1.32
COPA-203ENST00000481040 THG1LQ9NWX6 298 aaKnown RBP6.82□□□□□ -1.32
COPA-203ENST00000481040 IFIT2P09913 472 aaKnown RBP6.81□□□□□ -1.32
COPA-203ENST00000481040 NBPF7P0C2Y1 421 aaPredicted RBP6.81□□□□□ -1.32
COPA-203ENST00000481040 H2AFB1P0C5Y9 115 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms