RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 CNNM2Q9H8M5 875 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 ZNHIT6Q9NWK9 470 aaKnown RBP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 MAGEC2Q9UBF1 373 aaPredicted RBP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 HDLBPQ00341 1268 aaKnown RBP11.64□□□□□ -0.55
SCAF4-203ENST00000434667 IFT88Q13099 833 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 HAUS3Q68CZ6 603 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 DYMQ7RTS9 669 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 CATIPQ7Z7H3 387 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 KLHL7Q8IXQ5 586 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 EPB41L5Q9HCM4 733 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 FAM184BQ9ULE4 1060 aa11.64□□□□□ -0.55
SCAF4-203ENST00000434667 ABCC12Q96J65 1359 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 XBP1P17861 261 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 TROAPQ12815 778 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 PPFIA1Q13136 1202 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 PUM3Q15397 648 aaKnown RBP11.63□□□□□ -0.55
SCAF4-203ENST00000434667 RRAGAQ7L523 313 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 TNFRSF25Q93038 417 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 MTMR8Q96EF0 704 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 OSBPL9Q96SU4 736 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
SCAF4-203ENST00000434667 MYCBPQ99417 103 aaPredicted RBP11.63□□□□□ -0.55
SCAF4-203ENST00000434667 SNX12Q9UMY4 172 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
SCAF4-203ENST00000434667 AKR1B10O60218 316 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 ARID4AP29374 1257 aaPredicted RBP11.63□□□□□ -0.55
SCAF4-203ENST00000434667 PDE4DQ08499 809 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 ELOA2Q8IYF1 753 aaPredicted RBP11.63□□□□□ -0.55
SCAF4-203ENST00000434667 PIGBQ92521 554 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 LPIN2Q92539 896 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 ESR2Q92731 530 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 FERMT2Q96AC1 680 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 VIPAS39Q9H9C1 493 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 PRDM11Q9NQV5 511 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 EXOC1Q9NV70 894 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 MYO1AQ9UBC5 1043 aa11.63□□□□□ -0.55
SCAF4-203ENST00000434667 NID2Q14112 1375 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 ZNF233A6NK53 670 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 TMOD1P28289 359 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 SLC1A4P43007 532 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 SLC4A9Q96Q91 983 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 PCDHA13Q9Y5I0 950 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 KLRC4O43908 158 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 SHOX2O60902 331 aaPredicted RBP11.62□□□□□ -0.55
SCAF4-203ENST00000434667 CYLC1P35663 651 aaPredicted RBP11.62□□□□□ -0.55
SCAF4-203ENST00000434667 OTUD6BQ8N6M0 293 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 KRT12Q99456 494 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 TMOD3Q9NYL9 352 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 MYH2Q9UKX2 1941 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 ASIC1P78348 528 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 KRT83P78385 493 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 SPA17Q15506 151 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 TDRD12Q587J7 1177 aaKnown RBP11.62□□□□□ -0.55
SCAF4-203ENST00000434667 TTI2Q6NXR4 508 aa11.62□□□□□ -0.55
SCAF4-203ENST00000434667 LRRC53A6NM62 1247 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 NUTM2BA6NNL0 878 aaPredicted RBP11.61□□□□□ -0.55
SCAF4-203ENST00000434667 NUTM2EB1AL46 878 aaPredicted RBP11.61□□□□□ -0.55
SCAF4-203ENST00000434667 KLRK1P26718 216 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 UBA7P41226 1012 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 CKAP4Q07065 602 aaKnown RBP11.61□□□□□ -0.55
SCAF4-203ENST00000434667 C8orf74Q6P047 294 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 GIGYF2Q6Y7W6 1299 aaKnown RBP11.61□□□□□ -0.55
SCAF4-203ENST00000434667 CXorf56Q9H5V9 222 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 VAT1LQ9HCJ6 419 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 BRMS1Q9HCU9 246 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 DISC1Q9NRI5 854 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 TBC1D7Q9P0N9 293 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 H7C1D1 291 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 PDHBP11177 359 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 PLCG1P19174 1290 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 KIF11P52732 1056 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 SPAG1Q07617 926 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 TUBB2AQ13885 445 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 E2F5Q15329 346 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 MIIPQ5JXC2 388 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 TUBB2BQ9BVA1 445 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 PACSIN1Q9BY11 444 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 E7EVH7 732 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 SEMA3EO15041 775 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 HSF2BPO75031 334 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 HEXIM1O94992 359 aaKnown RBP11.61□□□□□ -0.55
SCAF4-203ENST00000434667 SLC5A1P13866 664 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 TMTC3Q6ZXV5 915 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 TRMT1LQ7Z2T5 733 aaKnown RBP11.61□□□□□ -0.55
SCAF4-203ENST00000434667 ZNF384Q8TF68 577 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 TTYH3Q9C0H2 523 aa11.61□□□□□ -0.55
SCAF4-203ENST00000434667 GOLGA6L7A0A1B0GV03 622 aa11.6□□□□□ -0.55
SCAF4-203ENST00000434667 OPLAHO14841 1288 aa11.6□□□□□ -0.55
SCAF4-203ENST00000434667 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
SCAF4-203ENST00000434667 SRGNP10124 158 aa11.6□□□□□ -0.55
SCAF4-203ENST00000434667 SCP2P22307 547 aa11.6□□□□□ -0.55
SCAF4-203ENST00000434667 MAP2K2P36507 400 aa11.6□□□□□ -0.55
SCAF4-203ENST00000434667 ALX1Q15699 326 aa11.6□□□□□ -0.55
SCAF4-203ENST00000434667 HEATR3Q7Z4Q2 680 aa11.6□□□□□ -0.55
SCAF4-203ENST00000434667 MARCH10Q8NA82 808 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms