RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 EIF2S2P20042 333 aaKnown RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 KCNA3P22001 575 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 RPIAP49247 311 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 ERVK-9P63128 1117 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 CHAF1AQ13111 956 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 CAMK2GQ13555 558 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 PUM3Q15397 648 aaKnown RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 PROSER3Q2NL68 480 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 CXorf57Q6NSI4 855 aaKnown RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 LVRNQ6Q4G3 990 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 DDX46Q7L014 1031 aaKnown RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 SKAP1Q86WV1 359 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 SCUBE3Q8IX30 993 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 OR6P1Q8NGX9 317 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 FBXO27Q8NI29 283 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 SNX29Q8TEQ0 813 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 LEO1Q8WVC0 666 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 CLUHP3Q96NS8 147 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 ALDH8A1Q9H2A2 487 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 SUV39H2Q9H5I1 410 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 OSGEPQ9NPF4 335 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 ATP13A2Q9NQ11 1180 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 PRDM9Q9NQV7 894 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 HYPKQ9NX55 129 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 DBF4Q9UBU7 674 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 TRHDEQ9UKU6 1024 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 AKAP2Q9Y2D5 859 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 MAP4K5Q9Y4K4 846 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 TNKSO95271 1327 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 IBTKQ9P2D0 1353 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 SLX4Q8IY92 1834 aa6.38□□□□□ -1.39
HMGB3P7-201ENST00000400214 DDX60Q8IY21 1712 aaKnown RBP6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 RIC1Q4ADV7 1423 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 EML1O00423 815 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 ADCY3O60266 1144 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 RHOBTB3O94955 611 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 RPLP1P05386 114 aaKnown RBP6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 MYL6BP14649 208 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 CPEP16870 476 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 LIG3P49916 1009 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 RBM10P98175 930 aaKnown RBP6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 LMNB2Q03252 620 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 MTFR1Q15390 333 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 HLFQ16534 295 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 RTN1Q16799 776 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 PRR5LQ6MZQ0 368 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 BPHLQ86WA6 291 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 LSRQ86X29 649 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 ZNF34Q8IZ26 560 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 CYP4X1Q8N118 509 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 C8orf58Q8NAV2 365 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 GLIS3Q8NEA6 775 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 ZNF669Q96BR6 464 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 SPATA9Q9BWV2 254 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 BRIP1Q9BX63 1249 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 NCOA5Q9HCD5 579 aaKnown RBP6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 SAGE1Q9NXZ1 904 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 ZFATQ9P243 1243 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 IP6K2Q9UHH9 426 aa6.37□□□□□ -1.39
HMGB3P7-201ENST00000400214 RNF123Q5XPI4 1314 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 FANCIQ9NVI1 1328 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 DNAJC25-GNG10A0A024R161 153 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 A0A0G2JLW4 131 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 BICDL2A1A5D9 508 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 ERVH48-1M5A8F1 160 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 GPR39O43194 453 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 FIBPO43427 364 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 GRIN3BO60391 1043 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 RLBP1P12271 317 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 DPEP1P16444 411 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 YBX3P16989 372 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 TYRP1P17643 537 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 SDSP20132 328 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 TNFAIP3P21580 790 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 MCM4P33991 863 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 SMTNP53814 917 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 WNT7BP56706 349 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 ZNF280AP59817 542 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 STK3Q13188 491 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 BIRC3Q13489 604 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 STAT4Q14765 748 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 MSS51Q4VC12 460 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 CCDC30Q5VVM6 783 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 RNF219Q5W0B1 726 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 C1orf228Q6PIY5 440 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 TPTE2Q6XPS3 522 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 KIF6Q6ZMV9 814 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 ARMCX6Q7L4S7 300 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 COPS6Q7L5N1 327 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 LRRTM3Q86VH5 581 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 FAM178BQ8IXR5 827 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 FAM160A2Q8N612 972 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 TSPYL6Q8N831 410 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 ZSCAN1Q8NBB4 408 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 PLBD2Q8NHP8 589 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 PARD3BQ8TEW8 1205 aa6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 SNRNP27Q8WVK2 155 aaKnown RBP6.36□□□□□ -1.39
HMGB3P7-201ENST00000400214 KIF2CQ99661 725 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms