RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PLS1Q14651 629 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 CFAP58Q5T655 872 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 WWC2Q6AWC2 1192 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 USP17L2Q6R6M4 530 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 HHIPL2Q6UWX4 724 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 C11orf57Q6ZUT1 292 aaPredicted RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 TMTC3Q6ZXV5 915 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 CCDC125Q86Z20 511 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 MPHOSPH6Q99547 160 aaKnown RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 TMEM47Q9BQJ4 181 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 DESI2Q9BSY9 194 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PSTPIP2Q9H939 334 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 KCPQ6ZWJ8 1503 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PDS5AQ29RF7 1337 aaKnown RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 TMEM232C9JQI7 657 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 HNRNPH1P31943 449 aaKnown RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 HPDP32754 393 aaPredicted RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 TRAPPC10P48553 1259 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 ATP1A2P50993 1020 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 ANTXR2P58335 489 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PPARDQ03181 441 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 USH1GQ495M9 461 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 FKBP15Q5T1M5 1219 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 NAIF1Q69YI7 327 aaPredicted RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 ANKS4BQ8N8V4 417 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 LINC00301Q8NCQ3 95 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 SLC44A5Q8NCS7 719 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 NEDD1Q8NHV4 660 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 KIFC2Q96AC6 838 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PLIN2Q99541 437 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 AS3MTQ9HBK9 375 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 ABCB6Q9NP58 842 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 ANAPC4Q9UJX5 808 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PCDHA4Q9UN74 947 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFFL-202ENST00000394597 A0A087WWV3 80 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 TCRBV5S4A2TA0A5A2 114 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PPP1R12BO60237 982 aaPredicted RBP6.3□□□□□ -1.4
RFFL-202ENST00000394597 NMT2O60551 498 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 TADA3O75528 432 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 GDF11O95390 407 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PLEKHA8P1O95397 391 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PFKFB1P16118 471 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 SCP2P22307 547 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 SND1Q7KZF4 910 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFFL-202ENST00000394597 SV2BQ7L1I2 683 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 FBXO11Q86XK2 927 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 FAM114A1Q8IWE2 563 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 PRM3Q9NNZ6 103 aa6.3□□□□□ -1.4
RFFL-202ENST00000394597 E7EVH7 732 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 hCG_1984214I3L0E3 225 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 PSMA7O14818 248 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 NEFHP12036 1026 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 PCK1P35558 622 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 MTIF2P46199 727 aaKnown RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 IFT88Q13099 833 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 SPA17Q15506 151 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 CALCRLQ16602 461 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 INF2Q27J81 1249 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 TMEM179Q6ZVK1 233 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 STXBP4Q6ZWJ1 553 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 ZNF713Q8N859 430 aaPredicted RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 PRPF38AQ8NAV1 312 aaKnown RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 FBXO41Q8TF61 875 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 SPDL1Q96EA4 605 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 RIOK1Q9BRS2 568 aaKnown RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 LRWD1Q9UFC0 647 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 ZNRF3Q9ULT6 936 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 B4DLN1 442 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 AKR1B15C9JRZ8 316 aaPredicted RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 IL1R1P14778 569 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 DPEP1P16444 411 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 NLRP12P59046 1061 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 SPAG1Q07617 926 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 PSMD2Q13200 908 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 NR5A1Q13285 461 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 PRKG1Q13976 671 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 GPR162Q16538 588 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 CCDC174Q6PII3 467 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 NEK8Q86SG6 692 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 CPXCR1Q8N123 301 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 TRIM47Q96LD4 638 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 CTAGE1Q96RT6 745 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 PCDHA1Q9Y5I3 950 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 MRFAP1Q9Y605 127 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 STRCQ7RTU9 1775 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 KDM3BQ7LBC6 1761 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 SCN11AQ9UI33 1791 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 TBCAO75347 108 aaKnown RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 CFBP00751 764 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 VAV2P52735 878 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 ADKP55263 362 aaKnown RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 PTGDRQ13258 359 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 R3HDM1Q15032 1099 aaKnown RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 ZNF827Q17R98 1081 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 KCTD1Q719H9 257 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 SUGP1Q8IWZ8 645 aaKnown RBP6.29□□□□□ -1.4
RFFL-202ENST00000394597 EHBP1Q8NDI1 1231 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 CEP95Q96GE4 821 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms