RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TMEM191BP0C7N4 346 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 ABCB5Q2M3G0 1257 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 PPP4R1Q8TF05 950 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 EEF2KMTQ96G04 330 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 XDHP47989 1333 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 ADD2P35612 726 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 GUCY2DQ02846 1103 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 NRBP1Q9UHY1 535 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 LMNB1P20700 586 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 MAP7Q14244 749 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 DOK7Q18PE1 504 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 SLC35F6Q8N357 371 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 P2RX5Q93086 422 aa17.55■□□□□ 0.4
COL2A1-202ENST00000380518 RNF8O76064 485 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 ATF2P15336 505 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 GCFC2P16383 781 aaKnown RBP17.54■□□□□ 0.4
COL2A1-202ENST00000380518 RASSF7Q02833 373 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 USPL1Q5W0Q7 1092 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 PDZD4Q76G19 769 aaPredicted RBP17.54■□□□□ 0.4
COL2A1-202ENST00000380518 ABCC12Q96J65 1359 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 TCP10L2B9ZVM9 353 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 MYL1P05976 194 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 NR2F2P24468 414 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 PTK2Q05397 1052 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 ARHGEF25Q86VW2 580 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 SLC5A4Q9NY91 659 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
COL2A1-202ENST00000380518 IFNAR1P17181 557 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 BFSP1Q12934 665 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 MAP3K21Q5TCX8 1036 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 ADAT2Q7Z6V5 191 aaKnown RBP17.54■□□□□ 0.4
COL2A1-202ENST00000380518 PAGR1Q9BTK6 254 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 M0R2C6 588 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 GSDMBQ8TAX9 411 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 RUNDC3BQ96NL0 473 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 ZNF148Q9UQR1 794 aa17.54■□□□□ 0.4
COL2A1-202ENST00000380518 TXNDC9O14530 226 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 CRKLP46109 303 aaKnown RBP17.53■□□□□ 0.4
COL2A1-202ENST00000380518 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 SUGCTQ9HAC7 445 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 CCPG1Q9ULG6 757 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 CAPN7Q9Y6W3 813 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 CAPN9O14815 690 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 ATP8B1O43520 1251 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 ZNF853P0CG23 659 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 FKBP3Q00688 224 aaKnown RBP17.53■□□□□ 0.4
COL2A1-202ENST00000380518 C11orf57Q6ZUT1 292 aaPredicted RBP17.53■□□□□ 0.4
COL2A1-202ENST00000380518 MMS19Q96T76 1030 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 NRBP2Q9NSY0 501 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 MYO1FO00160 1098 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 MAN2A1Q16706 1144 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 LRCH2Q5VUJ6 765 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 PHLDB3Q6NSJ2 640 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 SLC17A8Q8NDX2 589 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 POMGNT1Q8WZA1 660 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 RAB3IPQ96QF0 476 aaPredicted RBP17.53■□□□□ 0.4
COL2A1-202ENST00000380518 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 LRRIQ4A6NIV6 560 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 GAP43P17677 238 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 POLGP54098 1239 aaPredicted RBP17.53■□□□□ 0.4
COL2A1-202ENST00000380518 PABPC4Q13310 644 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL2A1-202ENST00000380518 NT5C1BQ96P26 610 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 ANTXR1Q9H6X2 564 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 STK38LQ9Y2H1 464 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 ZBTB1Q9Y2K1 713 aa17.53■□□□□ 0.4
COL2A1-202ENST00000380518 hCG_1984214I3L0E3 225 aa17.52■□□□□ 0.4
COL2A1-202ENST00000380518 MMP1P03956 469 aa17.52■□□□□ 0.4
COL2A1-202ENST00000380518 MFAP3P55082 362 aa17.52■□□□□ 0.4
COL2A1-202ENST00000380518 MYL7Q01449 175 aa17.52■□□□□ 0.4
COL2A1-202ENST00000380518 ZNF713Q8N859 430 aaPredicted RBP17.52■□□□□ 0.4
COL2A1-202ENST00000380518 STK17AQ9UEE5 414 aa17.52■□□□□ 0.4
COL2A1-202ENST00000380518 ERVK-7P63135 1459 aa17.52■□□□□ 0.4
COL2A1-202ENST00000380518 NEO1Q92859 1461 aa17.52■□□□□ 0.4
COL2A1-202ENST00000380518 SPC25Q9HBM1 224 aa17.52■□□□□ 0.4
COL2A1-202ENST00000380518 HIP1RO75146 1068 aa17.52■□□□□ 0.39
COL2A1-202ENST00000380518 ZNF658Q5TYW1 1059 aaPredicted RBP17.52■□□□□ 0.39
COL2A1-202ENST00000380518 CACTINQ8WUQ7 758 aaKnown RBP17.52■□□□□ 0.39
COL2A1-202ENST00000380518 PDE11AQ9HCR9 933 aa17.52■□□□□ 0.39
COL2A1-202ENST00000380518 ATP7BP35670 1465 aa17.52■□□□□ 0.39
COL2A1-202ENST00000380518 ENOX1Q8TC92 643 aaKnown RBP17.52■□□□□ 0.39
COL2A1-202ENST00000380518 CPSF2Q9P2I0 782 aaKnown RBP17.52■□□□□ 0.39
COL2A1-202ENST00000380518 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 TTLL1O95922 423 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 RPS6KA2Q15349 733 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 NAA35Q5VZE5 725 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 UHMK1Q8TAS1 419 aaKnown RBP17.51■□□□□ 0.39
COL2A1-202ENST00000380518 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
COL2A1-202ENST00000380518 PSMC2P35998 433 aaKnown RBP17.51■□□□□ 0.39
COL2A1-202ENST00000380518 KIF11P52732 1056 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 IRX4P78413 519 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 LMNB2Q03252 620 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 RBL2Q08999 1139 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 NLGN1Q8N2Q7 840 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 RASGRP4Q8TDF6 673 aa17.51■□□□□ 0.39
COL2A1-202ENST00000380518 SH2B2O14492 632 aaPredicted RBP17.51■□□□□ 0.39
COL2A1-202ENST00000380518 HNRNPDLO14979 420 aaKnown RBP17.51■□□□□ 0.39
COL2A1-202ENST00000380518 TMOD1P28289 359 aa17.5■□□□□ 0.39
COL2A1-202ENST00000380518 MAP7D3Q8IWC1 876 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms