RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TMBIM4Q9HC24 238 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 INCENPQ9NQS7 918 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 ZNF330Q9Y3S2 320 aaPredicted RBP22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 HEXIM1O94992 359 aaKnown RBP22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 PAK2Q13177 524 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 TRADDQ15628 312 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 CCDC57Q2TAC2 916 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 CCT6BQ92526 530 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 WASF1Q92558 559 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 TRPC6Q9Y210 931 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 MYH13Q9UKX3 1938 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 KCPQ6ZWJ8 1503 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 STRCP1A6NGW2 1772 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 CMTR1Q8N1G2 835 aaKnown RBP22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 C3orf20Q8ND61 904 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 APPBP2Q92624 585 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 TSGA10Q9BZW7 698 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 GDAQ9Y2T3 454 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 RASSF10A6NK89 507 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 PPP1R7Q15435 360 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 TMEM67Q5HYA8 995 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 ARFGAP2Q8N6H7 521 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 SLC12A6Q9UHW9 1150 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 L3MBTL1Q9Y468 752 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 UBR2Q8IWV8 1755 aa22.79■■□□□ 1.24
TMEFF1-201ENST00000374879 PLEKP08567 350 aaPredicted RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 TRIM21P19474 475 aaKnown RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 PRCPP42785 496 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 CDC37Q16543 378 aaPredicted RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 CCDC85AQ96PX6 553 aaPredicted RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 SH2D4AQ9H788 454 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 NUTM2BA6NNL0 878 aaPredicted RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 NUTM2EB1AL46 878 aaPredicted RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 ANP32DO95626 131 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 IFNAR1P17181 557 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 ADORA1P30542 326 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 TTYH3Q9C0H2 523 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 C15orf41Q9Y2V0 281 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 SLC12A7Q9Y666 1083 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 ZFYP08048 801 aaPredicted RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 SEMA3FQ13275 785 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 CAPRIN2Q6IMN6 1127 aaKnown RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 SPDYE1Q8NFV5 336 aaPredicted RBP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 CASKIN2Q8WXE0 1202 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 SPAG5Q96R06 1193 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 MTRQ99707 1265 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 TBC1D2BQ9UPU7 963 aa22.78■■□□□ 1.24
TMEFF1-201ENST00000374879 C5orf60A6NFR6 353 aa22.77■■□□□ 1.24
TMEFF1-201ENST00000374879 B4DLN1 442 aa22.77■■□□□ 1.24
TMEFF1-201ENST00000374879 H7C1D1 291 aa22.77■■□□□ 1.24
TMEFF1-201ENST00000374879 PPIP5K2O43314 1243 aa22.77■■□□□ 1.24
TMEFF1-201ENST00000374879 SPA17Q15506 151 aa22.77■■□□□ 1.24
TMEFF1-201ENST00000374879 TMEM87BQ96K49 555 aa22.77■■□□□ 1.24
TMEFF1-201ENST00000374879 TRIM75PA6NK02 468 aa22.77■■□□□ 1.23
TMEFF1-201ENST00000374879 USO1O60763 962 aaKnown RBP22.77■■□□□ 1.23
TMEFF1-201ENST00000374879 SGMS1Q86VZ5 419 aa22.77■■□□□ 1.23
TMEFF1-201ENST00000374879 OR2W6PQ8NHA6 318 aa22.77■■□□□ 1.23
TMEFF1-201ENST00000374879 RAPGEF5Q92565 580 aa22.77■■□□□ 1.23
TMEFF1-201ENST00000374879 KDM4CQ9H3R0 1056 aa22.77■■□□□ 1.23
TMEFF1-201ENST00000374879 GOLGA6L10A6NI86 522 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 PMS1P54277 932 aaKnown RBP22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 CTDSPL2Q05D32 466 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 ZNF658Q5TYW1 1059 aaPredicted RBP22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 CCDC42Q96M95 316 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 ISCA1Q9BUE6 129 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 PDS5AQ29RF7 1337 aaKnown RBP22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 SPEF2Q9C093 1822 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 PHF20L1A8MW92 1017 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 WNT7AO00755 349 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 SCARF1Q14162 830 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 NKX1-1Q15270 411 aaPredicted RBP22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 EARS2Q5JPH6 523 aaKnown RBP22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 MIS18BP1Q6P0N0 1132 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 TAX1BP1Q86VP1 789 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 TCP11Q8WWU5 503 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 IFIH1Q9BYX4 1025 aaKnown RBP22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 PCDHA13Q9Y5I0 950 aa22.76■■□□□ 1.23
TMEFF1-201ENST00000374879 RWDD2BP57060 319 aa22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 TCIRG1Q13488 830 aa22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 CNOT8Q9UFF9 292 aaKnown RBP22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 SNUPNO95149 360 aaKnown RBP22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 GHRP10912 638 aa22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 IL2RBP14784 551 aa22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 ZBED6P86452 979 aa22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 GKAP1Q5VSY0 366 aaPredicted RBP22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 TRIM22Q8IYM9 498 aa22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 CCDC47Q96A33 483 aaKnown RBP22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 TLR10Q9BXR5 811 aa22.75■■□□□ 1.23
TMEFF1-201ENST00000374879 GCOM1H8Y6P7 765 aaPredicted RBP22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 SMNDC1O75940 238 aaKnown RBP eCLIP22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 CLSTN1O94985 981 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 CLTAP09496 248 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 MYZAPP0CAP1 466 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 SNX1Q13596 522 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 FAM89AQ96GI7 184 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 ZNF570Q96NI8 536 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 SRGNP10124 158 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 ZAP70P43403 619 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms