RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PLAGL2Q9UPG8 496 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 EP400Q96L91 3159 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 CPLX1O14810 134 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 RTN2O75298 545 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 PRDM1O75626 825 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 RHOXF2BP0C7M4 288 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 HNRNPH1P31943 449 aaKnown RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 KRT2P35908 639 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 SART3Q15020 963 aaKnown RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 VPS72Q15906 364 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 HOMER1Q86YM7 354 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 FNBP4Q8N3X1 1017 aaPredicted RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 MNS1Q8NEH6 495 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 SLF1Q9BQI6 1058 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 RHOXF2Q9BQY4 288 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 LRRC1Q9BTT6 524 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ANKRD2Q9GZV1 360 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ARMT1Q9H993 441 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 CABP5Q9NP86 173 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 NARFQ9UHQ1 456 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ZNF652Q9Y2D9 606 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 STXBP5LQ9Y2K9 1186 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 PCDHA3Q9Y5H8 950 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 GAKO14976 1311 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ZNF536O15090 1300 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 IVLP07476 585 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 SNHG28P0DPA3 235 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 IL1R1P14778 569 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 CENPPQ6IPU0 288 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 KDM7AQ6ZMT4 941 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 C3orf67Q6ZVT6 689 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 AMOTL1Q8IY63 956 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 TRIM22Q8IYM9 498 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 TMEM174Q8WUU8 243 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 MTMR8Q96EF0 704 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 SPZ1Q9BXG8 430 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 HAUS4Q9H6D7 363 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 EHD2Q9NZN4 543 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 JRKLQ9Y4A0 524 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 TNKSO95271 1327 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 MYH11P35749 1972 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 MAGEB6P1A0A0J9YX57 407 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 IFIT3O14879 490 aaKnown RBP6.1□□□□□ -1.43
VPS50-202ENST00000305866 TUBBP07437 444 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 GLI1P08151 1106 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 PPP1R2P41236 205 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 STX17P56962 302 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 PTGDRQ13258 359 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 NNTQ13423 1086 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 LINC00116Q8NCU8 138 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 SMCR8Q8TEV9 937 aaPredicted RBP6.1□□□□□ -1.43
VPS50-202ENST00000305866 NEUROG2Q9H2A3 272 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 ZSWIM4Q9H7M6 989 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 DCP1AQ9NPI6 582 aaPredicted RBP6.1□□□□□ -1.43
VPS50-202ENST00000305866 BLOC1S4Q9NUP1 217 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 SLC4A4Q9Y6R1 1079 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 RPN1P04843 607 aaKnown RBP6.1□□□□□ -1.43
VPS50-202ENST00000305866 BCAMP50895 628 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 PIP4K2BP78356 416 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 MKRN4PQ13434 485 aaPredicted RBP6.1□□□□□ -1.43
VPS50-202ENST00000305866 MCM6Q14566 821 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 HYIQ5T013 277 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 C12orf60Q5U649 245 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 LRRC57Q8N9N7 239 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 NOC3LQ8WTT2 800 aaKnown RBP6.1□□□□□ -1.43
VPS50-202ENST00000305866 ZFP91Q96JP5 570 aaPredicted RBP6.1□□□□□ -1.43
VPS50-202ENST00000305866 AK8Q96MA6 479 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 NYXQ9GZU5 481 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 BLZF1Q9H2G9 400 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 MAD2L2Q9UI95 211 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 MCM8Q9UJA3 840 aa6.1□□□□□ -1.43
VPS50-202ENST00000305866 A0A087WUV0 522 aaPredicted RBP6.09□□□□□ -1.43
VPS50-202ENST00000305866 BTNL10A8MVZ5 291 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 RPS6KA4O75676 772 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 GPTP24298 496 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 IGHMBP2P38935 993 aaKnown RBP6.09□□□□□ -1.43
VPS50-202ENST00000305866 MARSP56192 900 aaKnown RBP6.09□□□□□ -1.43
VPS50-202ENST00000305866 EVA1CP58658 441 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 PDE4CQ08493 712 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 C2orf54Q08AI8 447 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 TRIM29Q14134 588 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 ANKRD40Q6AI12 368 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 OLFM4Q6UX06 510 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 NELFBQ8WX92 580 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 MTMR9Q96QG7 549 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 NCAPGQ9BPX3 1015 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 C7orf25Q9BPX7 421 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 ZKSCAN3Q9BRR0 538 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 NHEJ1Q9H9Q4 299 aaPredicted RBP6.09□□□□□ -1.43
VPS50-202ENST00000305866 TAB2Q9NYJ8 693 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 SMARCAL1Q9NZC9 954 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 FAM184BQ9ULE4 1060 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 TRIM75PA6NK02 468 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 PP2D1A8MPX8 630 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 F8W031 263 aaPredicted RBP6.09□□□□□ -1.43
VPS50-202ENST00000305866 EEF1GP26641 437 aaKnown RBP6.09□□□□□ -1.43
VPS50-202ENST00000305866 CCT6AP40227 531 aaKnown RBP6.09□□□□□ -1.43
VPS50-202ENST00000305866 MMS22LQ6ZRQ5 1243 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms