RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Grin3bQ91ZU9 1003 aa8.39□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Senp2Q91ZX6 588 aa8.39□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Igf2bp3Q9CPN8 579 aaKnown RBP8.39□□□□□ -1.07
Bdnf-209ENSMUST00000111050 CutaQ9CQ89 177 aa8.39□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Plcb1Q9Z1B3 1216 aa8.39□□□□□ -1.07
Bdnf-209ENSMUST00000111050 VirmaA2AIV2 1811 aaKnown RBP8.39□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Palm3A2TJV2 734 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cxcr2P35343 359 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 PctpP53808 214 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Shox2P70390 331 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Oxr1Q4KMM3 866 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 FsbpQ8BKE5 299 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Scfd2Q8BTY8 684 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 NsmfQ99NF2 532 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Arl10Q9QXJ4 243 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Psma7Q9Z2U0 248 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Znf536Q8K083 1302 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Trappc11B2RXC1 1133 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Fam129cD3YZB0 591 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gm4307E9PZY4 289 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gm21969J3QJZ1 289 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gm4312K9J7E2 289 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Rab21P35282 222 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ugt1a2P70691 533 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cacna2d4Q5RJF7 1116 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cnot10Q8BH15 744 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Wasf2Q8BH43 497 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Nod2Q8K3Z0 1020 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 SmtnQ921U8 923 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Xpo6Q924Z6 1125 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cdk9Q99J95 372 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 PfasQ5SUR0 1337 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Diaph2O70566 1098 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tnnc1P19123 161 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 PpardP35396 440 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Fam89aQ14BJ1 175 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Kif5bQ61768 963 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Mea1Q64327 174 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Inpp5fQ8CDA1 1132 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tbc1d23Q8K0F1 684 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Coq6Q8R1S0 476 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Jph2Q9ET78 696 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Suclg2Q9Z2I8 433 aa8.38□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Pfkfb3A7UAK5 555 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ces1hD3Z298 562 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Oprl1P35377 367 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ccdc127Q3TC33 260 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 NfkbibQ60778 359 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Krt12Q64291 487 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Naa15Q80UM3 865 aaKnown RBP8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Maip1Q8BHE8 291 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Plcb4Q91UZ1 1175 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Zmynd10Q99ML0 440 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 ArpinQ9D0A3 226 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Fsip1Q9D3V5 435 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Sgpp1Q9JI99 430 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gm5934D3Z4U6 212 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Hap1O35668 628 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Prl2c3P04768 224 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tmtc1Q3UV71 942 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Dclk3Q8BWQ5 790 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Taok3Q8BYC6 898 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 GlmnQ8BZM1 596 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Slc39a6Q8C145 765 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Rtn1Q8K0T0 780 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Rdm1Q9CQK3 281 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cd44P15379 778 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Xrcc6P23475 608 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ephb2P54763 986 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Foxp1P58462 705 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Nhej1Q3KNJ2 295 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 TwistnbQ78WZ7 330 aaKnown RBP8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 WhrnQ80VW5 918 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Sptlc3Q8BG54 563 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 NcaldQ91X97 193 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Pcdhb22Q91XZ8 794 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Dnajc3Q91YW3 504 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cd2apQ9JLQ0 637 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Pdcd7Q9WTY1 482 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Kif9Q9WV04 790 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gys1Q9Z1E4 738 aaKnown RBP8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Pitpnm2Q6ZPQ6 1335 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Frmd7A2AD83 703 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gm3415J3QMS8 315 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 MthfslL7N466 203 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Parp2O88554 559 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Krt8P11679 490 aaKnown RBP8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gjc1P28229 396 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 ClgnP52194 611 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Pde4dQ01063 747 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Nlrp1aQ2LKU9 1182 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Lilrb4Q64281 335 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Atg9aQ68FE2 551 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Txndc16Q7TN22 820 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Prpf38bQ80SY5 542 aaKnown RBP8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Klhl29Q80T74 875 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Nop9Q8BMC4 636 aaKnown RBP8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cfap57Q9D180 1249 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tktl2Q9D4D4 627 aa8.37□□□□□ -1.07
Bdnf-209ENSMUST00000111050 2310002L09RikQ9D7L5 217 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms