RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A SRN2Q99176 213 aa15.31■□□□□ 0.04
TRN1tP(UGG)A MAP2P38174 421 aaKnown RBP15.3■□□□□ 0.04
TRN1tP(UGG)A MUM2P38236 366 aa15.3■□□□□ 0.04
TRN1tP(UGG)A INM1P38710 295 aa15.3■□□□□ 0.04
TRN1tP(UGG)A FKH2P41813 862 aa15.3■□□□□ 0.04
TRN1tP(UGG)A YJR149WP47177 404 aa15.3■□□□□ 0.04
TRN1tP(UGG)A YNL260CP53846 198 aa15.3■□□□□ 0.04
TRN1tP(UGG)A ROT1Q03691 256 aa15.3■□□□□ 0.04
TRN1tP(UGG)A TRP3P00937 484 aa15.29■□□□□ 0.04
TRN1tP(UGG)A STE3P06783 470 aa15.29■□□□□ 0.04
TRN1tP(UGG)A COS2P0CX12 379 aa15.29■□□□□ 0.04
TRN1tP(UGG)A COS3P0CX13 379 aa15.29■□□□□ 0.04
TRN1tP(UGG)A PRP4P20053 465 aaKnown RBP15.29■□□□□ 0.04
TRN1tP(UGG)A BUB2P26448 306 aaPredicted RBP15.29■□□□□ 0.04
TRN1tP(UGG)A COX13P32799 129 aa15.29■□□□□ 0.04
TRN1tP(UGG)A ARB1P40024 610 aaKnown RBP15.29■□□□□ 0.04
TRN1tP(UGG)A COS4P43542 379 aa15.29■□□□□ 0.04
TRN1tP(UGG)A CUS2P53830 285 aaPredicted RBP15.29■□□□□ 0.04
TRN1tP(UGG)A RAD34Q06665 692 aa15.29■□□□□ 0.04
TRN1tP(UGG)A GPB1Q08886 897 aa15.29■□□□□ 0.04
TRN1tP(UGG)A RRP42Q12277 265 aaPredicted RBP15.29■□□□□ 0.04
TRN1tP(UGG)A CAN1P04817 590 aa15.28■□□□□ 0.04
TRN1tP(UGG)A SPT3P06844 337 aa15.28■□□□□ 0.04
TRN1tP(UGG)A EXO70P19658 623 aa15.28■□□□□ 0.04
TRN1tP(UGG)A MGM101P32787 269 aaKnown RBP15.28■□□□□ 0.04
TRN1tP(UGG)A CBF5P33322 483 aaKnown RBP RIP-Chip data15.28■□□□□ 0.04not detected
TRN1tP(UGG)A RPS1AP33442 255 aaKnown RBP15.28■□□□□ 0.04
TRN1tP(UGG)A RFC3P38629 340 aa15.28■□□□□ 0.04
TRN1tP(UGG)A ZIM17P42844 174 aa15.28■□□□□ 0.04
TRN1tP(UGG)A NUP85P46673 744 aa15.28■□□□□ 0.04
TRN1tP(UGG)A COS12P53053 380 aa15.28■□□□□ 0.04
TRN1tP(UGG)A MDM34P53083 459 aa15.28■□□□□ 0.04
TRN1tP(UGG)A YNL010WP53981 241 aaKnown RBP15.28■□□□□ 0.04
TRN1tP(UGG)A ESA1Q08649 445 aa15.28■□□□□ 0.04
TRN1tP(UGG)A RGT2Q12300 763 aa15.28■□□□□ 0.04
TRN1tP(UGG)A POL2P21951 2222 aaKnown RBP15.28■□□□□ 0.04
TRN1tP(UGG)A ERG6P25087 383 aaKnown RBP15.27■□□□□ 0.04
TRN1tP(UGG)A TOA1P32773 286 aa15.27■□□□□ 0.04
TRN1tP(UGG)A YPT35P38815 214 aaKnown RBP15.27■□□□□ 0.04
TRN1tP(UGG)A YPS6P40583 537 aa15.27■□□□□ 0.04
TRN1tP(UGG)A SEC27P41811 889 aaKnown RBP15.27■□□□□ 0.04
TRN1tP(UGG)A CIS3P47001 227 aa15.27■□□□□ 0.04
TRN1tP(UGG)A YJR030CP47101 745 aa15.27■□□□□ 0.04
TRN1tP(UGG)A YPT32P51996 222 aaKnown RBP15.27■□□□□ 0.04
TRN1tP(UGG)A THI73Q07904 523 aa15.27■□□□□ 0.04
TRN1tP(UGG)A ATG29Q12092 213 aa15.27■□□□□ 0.04
TRN1tP(UGG)A YPR011CQ12251 326 aa15.27■□□□□ 0.04
TRN1tP(UGG)A ATG34Q12292 412 aa15.27■□□□□ 0.04
TRN1tP(UGG)A GPR1Q12361 961 aa15.27■□□□□ 0.04
TRN1tP(UGG)A ARG1P22768 420 aa15.26■□□□□ 0.03
TRN1tP(UGG)A PPH21P23594 369 aa15.26■□□□□ 0.03
TRN1tP(UGG)A MRPL37P36532 105 aa15.26■□□□□ 0.03
TRN1tP(UGG)A GCD10P41814 478 aa15.26■□□□□ 0.03
TRN1tP(UGG)A SSU1P41930 458 aa15.26■□□□□ 0.03
TRN1tP(UGG)A SGF73P53165 657 aa15.26■□□□□ 0.03
TRN1tP(UGG)A REX2P54964 269 aaKnown RBP15.26■□□□□ 0.03
TRN1tP(UGG)A FMN1Q03778 218 aa15.26■□□□□ 0.03
TRN1tP(UGG)A CTK1Q03957 528 aaKnown RBP15.26■□□□□ 0.03
TRN1tP(UGG)A YMR034CQ05131 434 aaPredicted RBP15.26■□□□□ 0.03
TRN1tP(UGG)A YPL245WQ12179 454 aaKnown RBP15.26■□□□□ 0.03
TRN1tP(UGG)A HSH49Q99181 213 aaPredicted RBP15.26■□□□□ 0.03
TRN1tP(UGG)A CAR1P00812 333 aaKnown RBP15.25■□□□□ 0.03
TRN1tP(UGG)A PTC1P35182 281 aa15.25■□□□□ 0.03
TRN1tP(UGG)A ELO1P39540 310 aa15.25■□□□□ 0.03
TRN1tP(UGG)A MET18P40469 1032 aa15.25■□□□□ 0.03
TRN1tP(UGG)A YFR020WP43600 232 aa15.25■□□□□ 0.03
TRN1tP(UGG)A SUN4P53616 420 aa15.25■□□□□ 0.03
TRN1tP(UGG)A LGE1Q02796 332 aaKnown RBP15.25■□□□□ 0.03
TRN1tP(UGG)A YDL129WQ07555 291 aa15.25■□□□□ 0.03
TRN1tP(UGG)A SUL2Q12325 893 aa15.25■□□□□ 0.03
TRN1tP(UGG)A HRP1Q99383 534 aaKnown RBP15.25■□□□□ 0.03
TRN1tP(UGG)A RMA1P36001 430 aaKnown RBP15.24■□□□□ 0.03
TRN1tP(UGG)A TRM7P38238 310 aaKnown RBP15.24■□□□□ 0.03
TRN1tP(UGG)A NHA1Q99271 985 aa15.24■□□□□ 0.03
TRN1tP(UGG)A MVD1P32377 396 aaKnown RBP15.23■□□□□ 0.03
TRN1tP(UGG)A PIM1P36775 1133 aa15.23■□□□□ 0.03
TRN1tP(UGG)A YAL037WP39728 267 aa15.23■□□□□ 0.03
TRN1tP(UGG)A NDE1P40215 560 aa15.23■□□□□ 0.03
TRN1tP(UGG)A HXT16P47185 567 aa15.23■□□□□ 0.03
TRN1tP(UGG)A HXT15P54854 567 aa15.23■□□□□ 0.03
TRN1tP(UGG)A UBP2Q01476 1272 aa15.23■□□□□ 0.03
TRN1tP(UGG)A YML096WQ04489 525 aa15.23■□□□□ 0.03
TRN1tP(UGG)A GLO2Q05584 274 aa15.23■□□□□ 0.03
TRN1tP(UGG)A FAR10Q06001 478 aa15.23■□□□□ 0.03
TRN1tP(UGG)A YDL121CQ07541 149 aa15.23■□□□□ 0.03
TRN1tP(UGG)A IOC2Q12072 812 aa15.23■□□□□ 0.03
TRN1tP(UGG)A ACC1Q00955 2233 aaKnown RBP15.23■□□□□ 0.03
TRN1tP(UGG)A TRM1P15565 570 aaKnown RBP15.22■□□□□ 0.03
TRN1tP(UGG)A PRP6P19735 899 aaPredicted RBP15.22■□□□□ 0.03
TRN1tP(UGG)A RAD14P28519 371 aa15.22■□□□□ 0.03
TRN1tP(UGG)A SIP2P34164 415 aaKnown RBP15.22■□□□□ 0.03
TRN1tP(UGG)A NTR2P36118 322 aaPredicted RBP15.22■□□□□ 0.03
TRN1tP(UGG)A LTP1P40347 161 aa15.22■□□□□ 0.03
TRN1tP(UGG)A YGL176CP46945 554 aa15.22■□□□□ 0.03
TRN1tP(UGG)A YEH2Q07950 538 aa15.22■□□□□ 0.03
TRN1tP(UGG)A RTK1Q12100 620 aaPredicted RBP15.22■□□□□ 0.03
TRN1tP(UGG)A HUA2Q12134 243 aa15.22■□□□□ 0.03
TRN1tP(UGG)A MDM35O60200 86 aa15.21■□□□□ 0.03
TRN1tP(UGG)A DBR1P24309 405 aaKnown RBP15.21■□□□□ 0.03
TRN1tP(UGG)A HXT4P32467 576 aa15.21■□□□□ 0.03
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms