RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C STB2P46679 850 aa8.16□□□□□ -1.1
SRP54YPR088C NAS6P50086 228 aa8.16□□□□□ -1.1
SRP54YPR088C NBP35P52920 328 aa8.16□□□□□ -1.1
SRP54YPR088C IMA1P53051 589 aa8.16□□□□□ -1.1
SRP54YPR088C MPS2P53159 387 aa8.16□□□□□ -1.1
SRP54YPR088C YGR053CP53234 283 aa8.16□□□□□ -1.1
SRP54YPR088C YDR476CQ03362 224 aa8.16□□□□□ -1.1
SRP54YPR088C ARG7Q04728 441 aa8.16□□□□□ -1.1
SRP54YPR088C RAD34Q06665 692 aa8.16□□□□□ -1.1
SRP54YPR088C YLR413WQ06689 675 aa8.16□□□□□ -1.1
SRP54YPR088C OPI10Q08202 246 aa8.16□□□□□ -1.1
SRP54YPR088C UAF30Q08747 228 aa8.16□□□□□ -1.1
SRP54YPR088C SAM4Q08985 325 aaKnown RBP8.16□□□□□ -1.1
SRP54YPR088C MEX67Q99257 599 aaKnown RBP8.16□□□□□ -1.1
SRP54YPR088C INH1P01097 85 aa8.15□□□□□ -1.1
SRP54YPR088C POL30P15873 258 aaKnown RBP8.15□□□□□ -1.1
SRP54YPR088C YCK2P23292 546 aaKnown RBP8.15□□□□□ -1.1
SRP54YPR088C YSR3P23501 404 aa8.15□□□□□ -1.1
SRP54YPR088C ARC35P53731 342 aaKnown RBP8.15□□□□□ -1.1
SRP54YPR088C PRO2P54885 456 aaKnown RBP8.15□□□□□ -1.1
SRP54YPR088C SMA1Q02651 245 aa8.15□□□□□ -1.1
SRP54YPR088C HPF1Q05164 967 aa8.15□□□□□ -1.1
SRP54YPR088C BCP1Q06338 283 aa8.15□□□□□ -1.1
SRP54YPR088C MCH5Q08777 521 aa8.15□□□□□ -1.1
SRP54YPR088C VPS68Q12016 184 aa8.15□□□□□ -1.1
SRP54YPR088C STE3P06783 470 aa8.14□□□□□ -1.11
SRP54YPR088C FUM1P08417 488 aaKnown RBP8.14□□□□□ -1.11
SRP54YPR088C PDC5P16467 563 aaKnown RBP8.14□□□□□ -1.11
SRP54YPR088C REC107P21651 314 aa8.14□□□□□ -1.11
SRP54YPR088C SPS22P25380 463 aa8.14□□□□□ -1.11
SRP54YPR088C CBF5P33322 483 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
SRP54YPR088C CAF4P36130 643 aa8.14□□□□□ -1.11
SRP54YPR088C ECM1P39715 212 aa8.14□□□□□ -1.11
SRP54YPR088C ILM1P47155 203 aa8.14□□□□□ -1.11
SRP54YPR088C MTR3P48240 250 aaPredicted RBP8.14□□□□□ -1.11
SRP54YPR088C YPT32P51996 222 aaKnown RBP8.14□□□□□ -1.11
SRP54YPR088C YGR015CP53208 328 aa8.14□□□□□ -1.11
SRP54YPR088C PRP38Q00723 242 aaPredicted RBP8.14□□□□□ -1.11
SRP54YPR088C ACL4Q03771 387 aa8.14□□□□□ -1.11
SRP54YPR088C VHS1Q03785 461 aa8.14□□□□□ -1.11
SRP54YPR088C YMR111CQ04461 462 aaPredicted RBP8.14□□□□□ -1.11
SRP54YPR088C SGT1Q08446 395 aa8.14□□□□□ -1.11
SRP54YPR088C TRM8Q12009 286 aa8.14□□□□□ -1.11
SRP54YPR088C RRP42Q12277 265 aaPredicted RBP8.14□□□□□ -1.11
SRP54YPR088C AI3P03877 415 aa8.14□□□□□ -1.11
SRP54YPR088C HXK2P04807 486 aaKnown RBP8.14□□□□□ -1.11
SRP54YPR088C SPT15P13393 240 aaKnown RBP8.14□□□□□ -1.11
SRP54YPR088C CLN2P20438 545 aa8.14□□□□□ -1.11
SRP54YPR088C ZIP1P31111 875 aa8.14□□□□□ -1.11
SRP54YPR088C CCR4P31384 837 aaKnown RBP8.14□□□□□ -1.11
SRP54YPR088C RMA1P36001 430 aaKnown RBP8.14□□□□□ -1.11
SRP54YPR088C SOL2P37262 315 aa8.14□□□□□ -1.11
SRP54YPR088C GIP1P38229 639 aa8.14□□□□□ -1.11
SRP54YPR088C GIC1P38785 314 aa8.14□□□□□ -1.11
SRP54YPR088C FMO1P38866 432 aa8.14□□□□□ -1.11
SRP54YPR088C YEL073CP39974 107 aa8.14□□□□□ -1.11
SRP54YPR088C GIM4P40005 111 aaKnown RBP8.14□□□□□ -1.11
SRP54YPR088C JEM1P40358 645 aa8.14□□□□□ -1.11
SRP54YPR088C BIR1P47134 954 aa8.14□□□□□ -1.11
SRP54YPR088C YJR149WP47177 404 aa8.14□□□□□ -1.11
SRP54YPR088C MDM34P53083 459 aa8.14□□□□□ -1.11
SRP54YPR088C YNR014WP53719 212 aa8.14□□□□□ -1.11
SRP54YPR088C YNL260CP53846 198 aa8.14□□□□□ -1.11
SRP54YPR088C OCA4P25366 362 aa8.13□□□□□ -1.11
SRP54YPR088C FTH1P38310 465 aa8.13□□□□□ -1.11
SRP54YPR088C YHR127WP38833 243 aaKnown RBP8.13□□□□□ -1.11
SRP54YPR088C SEC27P41811 889 aaKnown RBP8.13□□□□□ -1.11
SRP54YPR088C PFA3P42836 336 aa8.13□□□□□ -1.11
SRP54YPR088C YGL176CP46945 554 aa8.13□□□□□ -1.11
SRP54YPR088C MPS3P47069 682 aa8.13□□□□□ -1.11
SRP54YPR088C DYN3Q04949 312 aa8.13□□□□□ -1.11
SRP54YPR088C IOC2Q12072 812 aa8.13□□□□□ -1.11
SRP54YPR088C HUA2Q12134 243 aa8.13□□□□□ -1.11
SRP54YPR088C NSL1Q12143 216 aa8.13□□□□□ -1.11
SRP54YPR088C ATP6P00854 259 aa8.12□□□□□ -1.11
SRP54YPR088C HTA2P04912 132 aa8.12□□□□□ -1.11
SRP54YPR088C TUB1P09733 447 aaKnown RBP8.12□□□□□ -1.11
SRP54YPR088C SAN1P22470 610 aa8.12□□□□□ -1.11
SRP54YPR088C MEF1P25039 761 aa8.12□□□□□ -1.11
SRP54YPR088C CSM1P25651 190 aa8.12□□□□□ -1.11
SRP54YPR088C STE14P32584 239 aa8.12□□□□□ -1.11
SRP54YPR088C BMT2P38278 337 aa8.12□□□□□ -1.11
SRP54YPR088C HXT5P38695 592 aa8.12□□□□□ -1.11
SRP54YPR088C HPM1P40481 377 aa8.12□□□□□ -1.11
SRP54YPR088C YJR030CP47101 745 aa8.12□□□□□ -1.11
SRP54YPR088C FAA4P47912 694 aaKnown RBP8.12□□□□□ -1.11
SRP54YPR088C COQ5P49017 307 aa8.12□□□□□ -1.11
SRP54YPR088C SNO2P53823 222 aa8.12□□□□□ -1.11
SRP54YPR088C YPL113CQ02961 396 aa8.12□□□□□ -1.11
SRP54YPR088C ECM11Q04110 302 aa8.12□□□□□ -1.11
SRP54YPR088C YDR124WQ04608 324 aa8.12□□□□□ -1.11
SRP54YPR088C YMR034CQ05131 434 aaPredicted RBP8.12□□□□□ -1.11
SRP54YPR088C NAG1Q8TGN9 163 aa8.12□□□□□ -1.11
SRP54YPR088C SRN2Q99176 213 aa8.12□□□□□ -1.11
SRP54YPR088C NHA1Q99271 985 aa8.12□□□□□ -1.11
SRP54YPR088C ATP2P00830 511 aaKnown RBP8.11□□□□□ -1.11
SRP54YPR088C HOM2P13663 365 aaKnown RBP8.11□□□□□ -1.11
SRP54YPR088C PHO81P17442 1178 aa8.11□□□□□ -1.11
SRP54YPR088C HES1P35843 434 aa8.11□□□□□ -1.11
SRP54YPR088C MED8P38304 223 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms