RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W UIP4Q08926 304 aa3.77□□□□□ -1.81
ECM16YMR128W RCN2Q12044 265 aa3.77□□□□□ -1.81
ECM16YMR128W YLR125WQ12138 136 aa3.77□□□□□ -1.81
ECM16YMR128W UBX3Q12229 455 aa3.77□□□□□ -1.81
ECM16YMR128W HSH49Q99181 213 aaPredicted RBP3.77□□□□□ -1.81
ECM16YMR128W MF(ALPHA)1P01149 165 aa3.77□□□□□ -1.81
ECM16YMR128W ADE4P04046 510 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W PAB1P04147 577 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
ECM16YMR128W RPL11AP0C0W9 174 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W SYP1P25623 870 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W NDI1P32340 513 aa3.77□□□□□ -1.81
ECM16YMR128W BEM3P32873 1128 aa3.77□□□□□ -1.81
ECM16YMR128W PEX5P35056 612 aa3.77□□□□□ -1.81
ECM16YMR128W GLY1P37303 387 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W OTU2P38747 307 aaKnown RBP3.77□□□□□ -1.81
ECM16YMR128W GPB2P39717 880 aa3.77□□□□□ -1.81
ECM16YMR128W YJL055WP47044 245 aa3.77□□□□□ -1.81
ECM16YMR128W NHX1Q04121 633 aa3.77□□□□□ -1.81
ECM16YMR128W ARR1Q06596 294 aa3.77□□□□□ -1.81
ECM16YMR128W FMP45Q07651 309 aa3.77□□□□□ -1.81
ECM16YMR128W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
ECM16YMR128W RPL11BQ3E757 174 aaPredicted RBP3.77□□□□□ -1.81
ECM16YMR128W ACO1P19414 778 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
ECM16YMR128W HSP60P19882 572 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W RGT1P32862 1170 aa3.76□□□□□ -1.81
ECM16YMR128W AHP1P38013 176 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W ALG3P38179 458 aa3.76□□□□□ -1.81
ECM16YMR128W IST2P38250 946 aa3.76□□□□□ -1.81
ECM16YMR128W MMS4P38257 691 aa3.76□□□□□ -1.81
ECM16YMR128W EGD2P38879 174 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W FAD1P38913 306 aa3.76□□□□□ -1.81
ECM16YMR128W GEM1P39722 662 aa3.76□□□□□ -1.81
ECM16YMR128W MXR1P40029 184 aa3.76□□□□□ -1.81
ECM16YMR128W EFM3P47163 339 aa3.76□□□□□ -1.81
ECM16YMR128W RAI1P53063 387 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W TIM13P53299 105 aa3.76□□□□□ -1.81
ECM16YMR128W NRD1P53617 575 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
ECM16YMR128W CIK1Q01649 594 aa3.76□□□□□ -1.81
ECM16YMR128W EAR1Q03212 550 aa3.76□□□□□ -1.81
ECM16YMR128W GMC2Q06201 188 aa3.76□□□□□ -1.81
ECM16YMR128W VAM6Q07468 1049 aa3.76□□□□□ -1.81
ECM16YMR128W YOR378WQ08902 515 aa3.76□□□□□ -1.81
ECM16YMR128W YPL191CQ08930 360 aa3.76□□□□□ -1.81
ECM16YMR128W HTZ1Q12692 134 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W BRR1Q99177 341 aaPredicted RBP3.76□□□□□ -1.81
ECM16YMR128W MET17P06106 444 aa3.76□□□□□ -1.81
ECM16YMR128W NSP1P14907 823 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W SNF5P18480 905 aa3.76□□□□□ -1.81
ECM16YMR128W VPS33P20795 691 aa3.76□□□□□ -1.81
ECM16YMR128W RVS161P25343 265 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W CMK1P27466 446 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W MEI5P32489 222 aa3.76□□□□□ -1.81
ECM16YMR128W STE14P32584 239 aa3.76□□□□□ -1.81
ECM16YMR128W ADD66P36040 267 aa3.76□□□□□ -1.81
ECM16YMR128W YPK3P38070 525 aa3.76□□□□□ -1.81
ECM16YMR128W KRE29P40026 464 aa3.76□□□□□ -1.81
ECM16YMR128W YEN1P40028 759 aa3.76□□□□□ -1.81
ECM16YMR128W MSE1P48525 536 aa3.76□□□□□ -1.81
ECM16YMR128W DIE2P50076 525 aa3.76□□□□□ -1.81
ECM16YMR128W COG5P53951 403 aa3.76□□□□□ -1.81
ECM16YMR128W ALG11P53954 548 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W LSM3P57743 89 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W ARA2Q04212 335 aa3.76□□□□□ -1.81
ECM16YMR128W RIF2Q06208 395 aa3.76□□□□□ -1.81
ECM16YMR128W CRN1Q06440 651 aa3.76□□□□□ -1.81
ECM16YMR128W SWA2Q06677 668 aa3.76□□□□□ -1.81
ECM16YMR128W THP3Q12049 470 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W BBP1Q12365 385 aa3.76□□□□□ -1.81
ECM16YMR128W TPK2P06245 380 aa3.76□□□□□ -1.81
ECM16YMR128W RPA135P22138 1203 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W AMD2P22580 549 aa3.76□□□□□ -1.81
ECM16YMR128W BEM1P29366 551 aa3.76□□□□□ -1.81
ECM16YMR128W NTG1P31378 399 aa3.76□□□□□ -1.81
ECM16YMR128W YHR182WP38870 785 aa3.76□□□□□ -1.81
ECM16YMR128W YTA6P40328 754 aa3.76□□□□□ -1.81
ECM16YMR128W ARC35P53731 342 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W RMI1Q02685 241 aa3.76□□□□□ -1.81
ECM16YMR128W CLU1Q03690 1277 aaKnown RBP3.76□□□□□ -1.81
ECM16YMR128W RSC2Q06488 889 aa3.76□□□□□ -1.81
ECM16YMR128W NRT1Q08485 598 aa3.76□□□□□ -1.81
ECM16YMR128W HFI1Q12060 488 aa3.76□□□□□ -1.81
ECM16YMR128W APC2Q12440 853 aa3.76□□□□□ -1.81
ECM16YMR128W ARG3P05150 338 aa3.75□□□□□ -1.81
ECM16YMR128W BCY1P07278 416 aaKnown RBP3.75□□□□□ -1.81
ECM16YMR128W MSS18P08593 268 aa3.75□□□□□ -1.81
ECM16YMR128W FUN30P31380 1131 aa3.75□□□□□ -1.81
ECM16YMR128W MET22P32179 357 aa3.75□□□□□ -1.81
ECM16YMR128W ROT2P38138 954 aa3.75□□□□□ -1.81
ECM16YMR128W LYS9P38999 446 aa3.75□□□□□ -1.81
ECM16YMR128W PSP1P50896 841 aaKnown RBP3.75□□□□□ -1.81
ECM16YMR128W YGR117CP53270 476 aa3.75□□□□□ -1.81
ECM16YMR128W BRE4Q07660 1125 aa3.75□□□□□ -1.81
ECM16YMR128W MSM1P22438 575 aa3.75□□□□□ -1.81
ECM16YMR128W RAD27P26793 382 aa3.75□□□□□ -1.81
ECM16YMR128W SRP68P38687 599 aaKnown RBP3.75□□□□□ -1.81
ECM16YMR128W CYC2P38909 366 aa3.75□□□□□ -1.81
ECM16YMR128W MND2P40577 368 aa3.75□□□□□ -1.81
ECM16YMR128W FET4P40988 552 aa3.75□□□□□ -1.81
ECM16YMR128W CNN1P43618 361 aa3.75□□□□□ -1.81
ECM16YMR128W RSC9Q03124 581 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms