RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SEN1	YLR430W	SPH1	Q06160	661 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	BDS1	Q08347	646 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	YPL216W	Q08964	1102 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	MED1	Q12321	566 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	RRD2	Q12461	358 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	AFI1	Q99222	893 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	TY1B-DR3	Q99231	1755 aa		4.15	□□□□□ -1.75
SEN1	YLR430W	GPH1	P06738	902 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	STE3	P06783	470 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	YCR101C	P25607	182 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	BIO2	P32451	375 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	ECM25	P32525	599 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	CDC13	P32797	924 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	BDF1	P35817	686 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	ERG10	P41338	398 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	GPI1	P53306	609 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MNT4	P53745	580 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	PRP42	Q03776	544 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	THI3	Q07471	609 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SEN1	YLR430W	CSM1	P25651	190 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	GSH1	P32477	678 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	BEM3	P32873	1128 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	STV1	P37296	890 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	GND1	P38720	489 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	MIT1	P40002	666 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	LSM4	P40070	187 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	YJR107W	P47145	328 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	CPR8	P53728	308 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	CDC7	P06243	507 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	PHO81	P17442	1178 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MRPL44	P19956	98 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	PGS1	P25578	521 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	PAM1	P37304	830 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	BUD13	P46947	266 aa	Predicted RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	ERV14	P53173	138 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	ARK1	P53974	638 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	OPT2	Q06593	877 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	KEL3	Q08979	651 aa	Predicted RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	FRS1	P15624	595 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	AMD2	P22580	549 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	YCL049C	P25577	312 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MRPL15	P36523	253 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MRPL37	P36532	105 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	CYC2	P38909	366 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	RAD55	P38953	406 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	CPR7	P47103	393 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	ADO1	P47143	340 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	POP6	P53218	158 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	YNR068C	P53754	272 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	YAF9	P53930	226 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MDM30	Q05930	598 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	DIB1	Q06819	143 aa	Predicted RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	AAD15	Q08361	143 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MSC6	Q08818	692 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	HAL9	Q12180	1030 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MPD2	Q99316	277 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	FUR1	P18562	216 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	APA2	P22108	325 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	YCK1	P23291	538 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	ERG6	P25087	383 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	SBA1	P28707	216 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	NDI1	P32340	513 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	PDR3	P33200	976 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	ALG14	P38242	237 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	NEM1	P38757	446 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	CCC1	P47818	322 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	YGR153W	P48238	217 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	SPT20	P50875	604 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	YMR099C	Q03161	297 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	MMP1	Q12372	583 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	BI4	P03879	638 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	SAT4	P25333	603 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	MGT1	P26188	188 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MCM10	P32354	571 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	RPT3	P33298	428 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	MKS1	P34072	584 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	MRPL7	P36519	292 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	YBR241C	P38142	488 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	ERV15	P38312	142 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	AIM14	P53109	570 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	GPD1	Q00055	391 aa	Known RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	MRPS16	Q02608	121 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	UTP21	Q06078	939 aa	Predicted RBP	4.14	□□□□□ -1.75
SEN1	YLR430W	DDC1	Q08949	612 aa		4.14	□□□□□ -1.75
SEN1	YLR430W	RAD7	P06779	565 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	SNF3	P10870	884 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	UTR4	P32626	227 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	SPT10	P35208	640 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	NCL1	P38205	684 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	OSH7	P38755	437 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	TIR3	P40552	269 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	VTC4	P47075	721 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	CUS2	P53830	285 aa	Predicted RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	YNL095C	P53932	642 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	EMG1	Q06287	252 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	UGA1	P17649	471 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	HIS7	P33734	552 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	HIS6	P40545	261 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms