RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	UBP6	P43593	499 aa	Known RBP	15.15	■□□□□ 0.02
CCC1	YLR220W	MDM34	P53083	459 aa		15.15	■□□□□ 0.02
CCC1	YLR220W	AAT1	Q01802	451 aa		15.15	■□□□□ 0.02
CCC1	YLR220W	YMR034C	Q05131	434 aa	Predicted RBP	15.15	■□□□□ 0.02
CCC1	YLR220W	RAD34	Q06665	692 aa		15.15	■□□□□ 0.02
CCC1	YLR220W	AI3	P03877	415 aa		15.14	■□□□□ 0.01
CCC1	YLR220W	PPH21	P23594	369 aa		15.14	■□□□□ 0.01
CCC1	YLR220W	SIP2	P34164	415 aa	Known RBP	15.14	■□□□□ 0.01
CCC1	YLR220W	MUM2	P38236	366 aa		15.14	■□□□□ 0.01
CCC1	YLR220W	SHU2	P38957	223 aa		15.14	■□□□□ 0.01
CCC1	YLR220W	YFR020W	P43600	232 aa		15.14	■□□□□ 0.01
CCC1	YLR220W	NUP85	P46673	744 aa		15.14	■□□□□ 0.01
CCC1	YLR220W	RPN8	Q08723	338 aa	Known RBP	15.14	■□□□□ 0.01
CCC1	YLR220W	YLR049C	Q12110	428 aa		15.14	■□□□□ 0.01
CCC1	YLR220W	ATG34	Q12292	412 aa		15.14	■□□□□ 0.01
CCC1	YLR220W	MDM35	O60200	86 aa		15.13	■□□□□ 0.01
CCC1	YLR220W	DEF1	P35732	738 aa	Known RBP	15.13	■□□□□ 0.01
CCC1	YLR220W	RMA1	P36001	430 aa	Known RBP	15.13	■□□□□ 0.01
CCC1	YLR220W	UTP9	P38882	575 aa	Known RBP	15.13	■□□□□ 0.01
CCC1	YLR220W	SCS2	P40075	244 aa	Known RBP	15.13	■□□□□ 0.01
CCC1	YLR220W	GCV1	P48015	400 aa		15.13	■□□□□ 0.01
CCC1	YLR220W	GLO2	Q05584	274 aa		15.13	■□□□□ 0.01
CCC1	YLR220W	CAR1	P00812	333 aa	Known RBP	15.12	■□□□□ 0.01
CCC1	YLR220W	ARG1	P22768	420 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	DBR1	P24309	405 aa	Known RBP	15.12	■□□□□ 0.01
CCC1	YLR220W	BUB2	P26448	306 aa	Predicted RBP	15.12	■□□□□ 0.01
CCC1	YLR220W	COX13	P32799	129 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	RFC3	P38629	340 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	YAL037W	P39728	267 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	MET18	P40469	1032 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	FKH2	P41813	862 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	SUM1	P46676	1062 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	YJR030C	P47101	745 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	RNR4	P49723	345 aa	Known RBP	15.12	■□□□□ 0.01
CCC1	YLR220W	CUS2	P53830	285 aa	Predicted RBP	15.12	■□□□□ 0.01
CCC1	YLR220W	PFA4	Q12006	378 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	SUL2	Q12325	893 aa		15.12	■□□□□ 0.01
CCC1	YLR220W	HRP1	Q99383	534 aa	Known RBP	15.12	■□□□□ 0.01
CCC1	YLR220W	ERG6	P25087	383 aa	Known RBP	15.11	■□□□□ 0.01
CCC1	YLR220W	MGM101	P32787	269 aa	Known RBP	15.11	■□□□□ 0.01
CCC1	YLR220W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	15.11	■□□□□ 0.01	not detected
CCC1	YLR220W	PIM1	P36775	1133 aa		15.11	■□□□□ 0.01
CCC1	YLR220W	ERP5	P38819	212 aa		15.11	■□□□□ 0.01
CCC1	YLR220W	ELO1	P39540	310 aa		15.11	■□□□□ 0.01
CCC1	YLR220W	NDE1	P40215	560 aa		15.11	■□□□□ 0.01
CCC1	YLR220W	SEC27	P41811	889 aa	Known RBP	15.11	■□□□□ 0.01
CCC1	YLR220W	ZIM17	P42844	174 aa		15.11	■□□□□ 0.01
CCC1	YLR220W	YMR111C	Q04461	462 aa	Predicted RBP	15.11	■□□□□ 0.01
CCC1	YLR220W	THI73	Q07904	523 aa		15.11	■□□□□ 0.01
CCC1	YLR220W	ESA1	Q08649	445 aa		15.11	■□□□□ 0.01
CCC1	YLR220W	RRP36	Q12481	300 aa	Predicted RBP	15.11	■□□□□ 0.01
CCC1	YLR220W	INM1	P38710	295 aa		15.1	■□□□□ 0.01
CCC1	YLR220W	ARN1	P38731	627 aa		15.1	■□□□□ 0.01
CCC1	YLR220W	AXL2	P38928	823 aa		15.1	■□□□□ 0.01
CCC1	YLR220W	TY4A-J	P47023	414 aa		15.1	■□□□□ 0.01
CCC1	YLR220W	NAS6	P50086	228 aa		15.1	■□□□□ 0.01
CCC1	YLR220W	COS12	P53053	380 aa		15.1	■□□□□ 0.01
CCC1	YLR220W	SUN4	P53616	420 aa		15.1	■□□□□ 0.01
CCC1	YLR220W	YNL010W	P53981	241 aa	Known RBP	15.1	■□□□□ 0.01
CCC1	YLR220W	MHT1	Q12525	324 aa		15.1	■□□□□ 0.01
CCC1	YLR220W	RDS2	P19541	446 aa	Known RBP	15.09	■□□□□ 0.01
CCC1	YLR220W	MVD1	P32377	396 aa	Known RBP	15.09	■□□□□ 0.01
CCC1	YLR220W	MAP2	P38174	421 aa	Known RBP	15.09	■□□□□ 0.01
CCC1	YLR220W	YEN1	P40028	759 aa		15.09	■□□□□ 0.01
CCC1	YLR220W	YGL176C	P46945	554 aa		15.09	■□□□□ 0.01
CCC1	YLR220W	YNL260C	P53846	198 aa		15.09	■□□□□ 0.01
CCC1	YLR220W	LGE1	Q02796	332 aa	Known RBP	15.09	■□□□□ 0.01
CCC1	YLR220W	CTK1	Q03957	528 aa	Known RBP	15.09	■□□□□ 0.01
CCC1	YLR220W	YDL129W	Q07555	291 aa		15.09	■□□□□ 0.01
CCC1	YLR220W	IOC2	Q12072	812 aa		15.09	■□□□□ 0.01
CCC1	YLR220W	ATG29	Q12092	213 aa		15.09	■□□□□ 0.01
CCC1	YLR220W	COS2	P0CX12	379 aa		15.08	■□□□□ 0
CCC1	YLR220W	COS3	P0CX13	379 aa		15.08	■□□□□ 0
CCC1	YLR220W	PRP4	P20053	465 aa	Known RBP	15.08	■□□□□ 0
CCC1	YLR220W	UTH1	P36135	365 aa		15.08	■□□□□ 0
CCC1	YLR220W	TRM7	P38238	310 aa	Known RBP	15.08	■□□□□ 0
CCC1	YLR220W	GGC1	P38988	300 aa		15.08	■□□□□ 0
CCC1	YLR220W	COS4	P43542	379 aa		15.08	■□□□□ 0
CCC1	YLR220W	CIS3	P47001	227 aa		15.08	■□□□□ 0
CCC1	YLR220W	YPT32	P51996	222 aa	Known RBP	15.08	■□□□□ 0
CCC1	YLR220W	SDH1	Q00711	640 aa		15.08	■□□□□ 0
CCC1	YLR220W	UBP2	Q01476	1272 aa		15.08	■□□□□ 0
CCC1	YLR220W	EAF1	Q06337	982 aa		15.08	■□□□□ 0
CCC1	YLR220W	YEH2	Q07950	538 aa		15.08	■□□□□ 0
CCC1	YLR220W	CAN1	P04817	590 aa		15.07	■□□□□ 0
CCC1	YLR220W	FRE2	P36033	711 aa		15.07	■□□□□ 0
CCC1	YLR220W	RHO3	Q00245	231 aa	Known RBP	15.07	■□□□□ 0
CCC1	YLR220W	YLR413W	Q06689	675 aa		15.07	■□□□□ 0
CCC1	YLR220W	YDR056C	Q12025	205 aa		15.07	■□□□□ 0
CCC1	YLR220W	BRR1	Q99177	341 aa	Predicted RBP	15.07	■□□□□ 0
CCC1	YLR220W	TRP3	P00937	484 aa		15.06	■□□□□ 0
CCC1	YLR220W	HXK2	P04807	486 aa	Known RBP	15.06	■□□□□ 0
CCC1	YLR220W	TRM1	P15565	570 aa	Known RBP	15.06	■□□□□ 0
CCC1	YLR220W	OCA4	P25366	362 aa		15.06	■□□□□ 0
CCC1	YLR220W	OXP1	P28273	1286 aa		15.06	■□□□□ 0
CCC1	YLR220W	HXT4	P32467	576 aa		15.06	■□□□□ 0
CCC1	YLR220W	TOA1	P32773	286 aa		15.06	■□□□□ 0
CCC1	YLR220W	YBR071W	P38243	211 aa		15.06	■□□□□ 0
CCC1	YLR220W	BMT2	P38278	337 aa		15.06	■□□□□ 0
CCC1	YLR220W	HXT6	P39003	570 aa	Known RBP	15.06	■□□□□ 0

Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms