RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W MET14Q02196 202 aa3.85□□□□□ -1.79
SSL1YLR005W UME1Q03010 460 aa3.85□□□□□ -1.79
SSL1YLR005W YMR160WQ03823 816 aa3.85□□□□□ -1.79
SSL1YLR005W RRN11Q04712 507 aa3.85□□□□□ -1.79
SSL1YLR005W DIC1Q06143 298 aa3.85□□□□□ -1.79
SSL1YLR005W YOL024WQ08172 172 aa3.85□□□□□ -1.79
SSL1YLR005W MCH5Q08777 521 aa3.85□□□□□ -1.79
SSL1YLR005W RRP6Q12149 733 aaKnown RBP3.85□□□□□ -1.79
SSL1YLR005W HAL9Q12180 1030 aa3.85□□□□□ -1.79
SSL1YLR005W OCA6Q12454 224 aa3.85□□□□□ -1.79
SSL1YLR005W MDM35O60200 86 aa3.84□□□□□ -1.79
SSL1YLR005W SEM1O94742 89 aa3.84□□□□□ -1.79
SSL1YLR005W CPA1P07258 411 aaKnown RBP3.84□□□□□ -1.79
SSL1YLR005W ERR1P0CX10 437 aa3.84□□□□□ -1.79
SSL1YLR005W ERR2P0CX11 437 aa3.84□□□□□ -1.79
SSL1YLR005W GLN4P13188 809 aaKnown RBP3.84□□□□□ -1.79
SSL1YLR005W PMS1P14242 873 aa3.84□□□□□ -1.79
SSL1YLR005W APA1P16550 321 aaKnown RBP3.84□□□□□ -1.79
SSL1YLR005W CLC1P17891 233 aa3.84□□□□□ -1.79
SSL1YLR005W PHO13P19881 312 aa3.84□□□□□ -1.79
SSL1YLR005W HSP60P19882 572 aaKnown RBP3.84□□□□□ -1.79
SSL1YLR005W EPT1P22140 391 aa3.84□□□□□ -1.79
SSL1YLR005W PPH21P23594 369 aa3.84□□□□□ -1.79
SSL1YLR005W PHO84P25297 587 aaKnown RBP3.84□□□□□ -1.79
SSL1YLR005W RBK1P25332 333 aa3.84□□□□□ -1.79
SSL1YLR005W DCC1P25559 380 aa3.84□□□□□ -1.79
SSL1YLR005W YCL002CP25565 263 aa3.84□□□□□ -1.79
SSL1YLR005W MSH1P25846 959 aa3.84□□□□□ -1.79
SSL1YLR005W MEI4P29467 408 aa3.84□□□□□ -1.79
SSL1YLR005W AEP1P32493 518 aa3.84□□□□□ -1.79
SSL1YLR005W PIM1P36775 1133 aa3.84□□□□□ -1.79
SSL1YLR005W PCA1P38360 1216 aa3.84□□□□□ -1.79
SSL1YLR005W HIS2P38635 335 aa3.84□□□□□ -1.79
SSL1YLR005W YHR020WP38708 688 aaKnown RBP3.84□□□□□ -1.79
SSL1YLR005W DBP8P38719 431 aa3.84□□□□□ -1.79
SSL1YLR005W OTU2P38747 307 aaKnown RBP3.84□□□□□ -1.79
SSL1YLR005W RPP1P38786 293 aa3.84□□□□□ -1.79
SSL1YLR005W ELO3P40319 345 aa3.84□□□□□ -1.79
SSL1YLR005W HXT16P47185 567 aa3.84□□□□□ -1.79
SSL1YLR005W VAC7P53950 1165 aa3.84□□□□□ -1.79
SSL1YLR005W EFM6P53970 246 aa3.84□□□□□ -1.79
SSL1YLR005W SUR7P54003 302 aa3.84□□□□□ -1.79
SSL1YLR005W NGL3Q03210 505 aa3.84□□□□□ -1.79
SSL1YLR005W THI7Q05998 598 aa3.84□□□□□ -1.79
SSL1YLR005W BUD7Q08754 746 aa3.84□□□□□ -1.79
SSL1YLR005W FRE5Q08908 694 aa3.84□□□□□ -1.79
SSL1YLR005W NEW1Q08972 1196 aaKnown RBP3.84□□□□□ -1.79
SSL1YLR005W ACF2Q12168 779 aa3.84□□□□□ -1.79
SSL1YLR005W YLL056CQ12177 298 aa3.84□□□□□ -1.79
SSL1YLR005W COX5AP00424 153 aa3.83□□□□□ -1.8
SSL1YLR005W TUB1P09733 447 aaKnown RBP3.83□□□□□ -1.8
SSL1YLR005W YSP3P25036 478 aa3.83□□□□□ -1.8
SSL1YLR005W NTH1P32356 751 aa3.83□□□□□ -1.8
SSL1YLR005W SPS19P32573 292 aaKnown RBP3.83□□□□□ -1.8
SSL1YLR005W MRPL37P36532 105 aa3.83□□□□□ -1.8
SSL1YLR005W FAU1P40099 211 aa3.83□□□□□ -1.8
SSL1YLR005W ARG2P40360 574 aa3.83□□□□□ -1.8
SSL1YLR005W ATM1P40416 690 aa3.83□□□□□ -1.8
SSL1YLR005W ZIM17P42844 174 aa3.83□□□□□ -1.8
SSL1YLR005W UBP6P43593 499 aaKnown RBP3.83□□□□□ -1.8
SSL1YLR005W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SSL1YLR005W MUP1P50276 574 aa3.83□□□□□ -1.8
SSL1YLR005W COG1P53079 417 aa3.83□□□□□ -1.8
SSL1YLR005W YGR127WP53275 312 aa3.83□□□□□ -1.8
SSL1YLR005W NOG2P53742 486 aaKnown RBP3.83□□□□□ -1.8
SSL1YLR005W VPS75P53853 264 aa3.83□□□□□ -1.8
SSL1YLR005W RLI1Q03195 608 aaKnown RBP3.83□□□□□ -1.8
SSL1YLR005W LRS4Q04087 347 aaKnown RBP3.83□□□□□ -1.8
SSL1YLR005W DLT1Q04216 342 aa3.83□□□□□ -1.8
SSL1YLR005W STP3Q05937 343 aa3.83□□□□□ -1.8
SSL1YLR005W MCP2Q06567 569 aa3.83□□□□□ -1.8
SSL1YLR005W BSC6Q08280 497 aa3.83□□□□□ -1.8
SSL1YLR005W TRM8Q12009 286 aa3.83□□□□□ -1.8
SSL1YLR005W YDR262WQ12331 272 aa3.83□□□□□ -1.8
SSL1YLR005W MET3P08536 511 aa3.82□□□□□ -1.8
SSL1YLR005W SLY1P22213 666 aa3.82□□□□□ -1.8
SSL1YLR005W RFA2P26754 273 aaKnown RBP3.82□□□□□ -1.8
SSL1YLR005W HOG1P32485 435 aa3.82□□□□□ -1.8
SSL1YLR005W CDC13P32797 924 aaKnown RBP3.82□□□□□ -1.8
SSL1YLR005W PHO11P35842 467 aa3.82□□□□□ -1.8
SSL1YLR005W YPT53P36019 220 aa3.82□□□□□ -1.8
SSL1YLR005W GMH1P36125 273 aa3.82□□□□□ -1.8
SSL1YLR005W MAK5P38112 773 aaPredicted RBP3.82□□□□□ -1.8
SSL1YLR005W ARA1P38115 344 aa3.82□□□□□ -1.8
SSL1YLR005W YBR259WP38338 688 aa3.82□□□□□ -1.8
SSL1YLR005W PHO12P38693 467 aa3.82□□□□□ -1.8
SSL1YLR005W DIA4P38705 446 aaPredicted RBP3.82□□□□□ -1.8
SSL1YLR005W CYC2P38909 366 aa3.82□□□□□ -1.8
SSL1YLR005W RSP5P39940 809 aaKnown RBP3.82□□□□□ -1.8
SSL1YLR005W SSU1P41930 458 aa3.82□□□□□ -1.8
SSL1YLR005W YJL107CP42947 387 aa3.82□□□□□ -1.8
SSL1YLR005W CTK3P46963 296 aaPredicted RBP3.82□□□□□ -1.8
SSL1YLR005W NIT3P49954 291 aa3.82□□□□□ -1.8
SSL1YLR005W ZRG17P53735 605 aa3.82□□□□□ -1.8
SSL1YLR005W RHO3Q00245 231 aaKnown RBP3.82□□□□□ -1.8
SSL1YLR005W UFO1Q04511 668 aa3.82□□□□□ -1.8
SSL1YLR005W OMS1Q06668 471 aa3.82□□□□□ -1.8
SSL1YLR005W YLR001CQ07895 862 aa3.82□□□□□ -1.8
SSL1YLR005W NRT1Q08485 598 aa3.82□□□□□ -1.8
SSL1YLR005W DAS2Q12084 232 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms