RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W FUI1P38196 639 aa4.01□□□□□ -1.77
SEC28YIL076W OSH3P38713 996 aaKnown RBP4.01□□□□□ -1.77
SEC28YIL076W BUD32P53323 261 aa4.01□□□□□ -1.77
SEC28YIL076W MSC1Q03104 513 aa4.01□□□□□ -1.77
SEC28YIL076W RLI1Q03195 608 aaKnown RBP4.01□□□□□ -1.77
SEC28YIL076W SMA2Q04658 369 aa4.01□□□□□ -1.77
SEC28YIL076W SDH5Q08230 162 aa4.01□□□□□ -1.77
SEC28YIL076W ARD1P07347 238 aaPredicted RBP4□□□□□ -1.77
SEC28YIL076W FUM1P08417 488 aaKnown RBP4□□□□□ -1.77
SEC28YIL076W RPL20AP0CX23 172 aaKnown RBP4□□□□□ -1.77
SEC28YIL076W RPL20BP0CX24 172 aaPredicted RBP4□□□□□ -1.77
SEC28YIL076W PEP5P12868 1029 aa4□□□□□ -1.77
SEC28YIL076W PRE8P23639 250 aa4□□□□□ -1.77
SEC28YIL076W BOS1P25385 244 aa4□□□□□ -1.77
SEC28YIL076W SGF29P25554 259 aa4□□□□□ -1.77
SEC28YIL076W IMG1P25626 169 aa4□□□□□ -1.77
SEC28YIL076W PCA1P38360 1216 aa4□□□□□ -1.77
SEC28YIL076W DPH1P40487 425 aaKnown RBP4□□□□□ -1.77
SEC28YIL076W YJL132WP47014 750 aa4□□□□□ -1.77
SEC28YIL076W YGR127WP53275 312 aa4□□□□□ -1.77
SEC28YIL076W BSC5P53755 489 aa4□□□□□ -1.77
SEC28YIL076W YSA1Q01976 231 aa4□□□□□ -1.77
SEC28YIL076W SHR3Q02774 210 aa4□□□□□ -1.77
SEC28YIL076W SKM1Q12469 655 aa4□□□□□ -1.77
SEC28YIL076W CAR1P00812 333 aaKnown RBP3.99□□□□□ -1.77
SEC28YIL076W HEM2P05373 342 aa3.99□□□□□ -1.77
SEC28YIL076W PWP2P25635 923 aaKnown RBP3.99□□□□□ -1.77
SEC28YIL076W YKL023WP36103 277 aaKnown RBP3.99□□□□□ -1.77
SEC28YIL076W RPL32P38061 130 aaKnown RBP3.99□□□□□ -1.77
SEC28YIL076W ICS2P38284 255 aa3.99□□□□□ -1.77
SEC28YIL076W FAR3P46671 204 aa3.99□□□□□ -1.77
SEC28YIL076W SSP2Q08646 371 aa3.99□□□□□ -1.77
SEC28YIL076W REV1P12689 985 aa3.98□□□□□ -1.77
SEC28YIL076W AMD1P15274 810 aaKnown RBP3.98□□□□□ -1.77
SEC28YIL076W SPG5P42933 373 aa3.98□□□□□ -1.77
SEC28YIL076W APT1P49435 187 aaKnown RBP3.98□□□□□ -1.77
SEC28YIL076W ALT2P52892 507 aa3.98□□□□□ -1.77
SEC28YIL076W DSD1P53095 428 aa3.98□□□□□ -1.77
SEC28YIL076W YPL272CQ08984 517 aa3.98□□□□□ -1.77
SEC28YIL076W MF(ALPHA)1P01149 165 aa3.97□□□□□ -1.77
SEC28YIL076W KAR3P17119 729 aa3.97□□□□□ -1.77
SEC28YIL076W RER1P25560 188 aa3.97□□□□□ -1.77
SEC28YIL076W YCR022CP25620 114 aa3.97□□□□□ -1.77
SEC28YIL076W AUR1P36107 401 aaPredicted RBP3.97□□□□□ -1.77
SEC28YIL076W TIF5P38431 405 aaKnown RBP3.97□□□□□ -1.77
SEC28YIL076W YPI1P43587 155 aa3.97□□□□□ -1.77
SEC28YIL076W SCD6P45978 349 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SEC28YIL076W YGR126WP53274 230 aa3.97□□□□□ -1.77
SEC28YIL076W YML037CQ03703 340 aa3.97□□□□□ -1.77
SEC28YIL076W SYO1Q07395 620 aa3.97□□□□□ -1.77
SEC28YIL076W NCE102Q12207 173 aaRIP-Chip data3.97□□□□□ -1.77not detected
SEC28YIL076W YDL009CQ12210 107 aa3.97□□□□□ -1.77
SEC28YIL076W YIH1P25637 258 aa3.96□□□□□ -1.78
SEC28YIL076W SSE2P32590 693 aaKnown RBP3.96□□□□□ -1.78
SEC28YIL076W FRE1P32791 686 aa3.96□□□□□ -1.78
SEC28YIL076W PMU1P36069 295 aa3.96□□□□□ -1.78
SEC28YIL076W NPR2P39923 615 aa3.96□□□□□ -1.78
SEC28YIL076W IDP2P41939 412 aa3.96□□□□□ -1.78
SEC28YIL076W BUD22Q04347 519 aaKnown RBP3.96□□□□□ -1.78
SEC28YIL076W BNA5Q05979 453 aa3.96□□□□□ -1.78
SEC28YIL076W YDL057WQ07379 328 aa3.96□□□□□ -1.78
SEC28YIL076W LUC7Q07508 261 aaPredicted RBP3.96□□□□□ -1.78
SEC28YIL076W RPL19AP0CX82 189 aaKnown RBP3.95□□□□□ -1.78
SEC28YIL076W RPL19BP0CX83 189 aaPredicted RBP3.95□□□□□ -1.78
SEC28YIL076W SUI2P20459 304 aaKnown RBP3.95□□□□□ -1.78
SEC28YIL076W SAC6P32599 642 aaKnown RBP3.95□□□□□ -1.78
SEC28YIL076W YBR144CP34215 104 aa3.95□□□□□ -1.78
SEC28YIL076W UBP11P36026 717 aa3.95□□□□□ -1.78
SEC28YIL076W YBP1P38315 674 aa3.95□□□□□ -1.78
SEC28YIL076W AFG3P39925 761 aa3.95□□□□□ -1.78
SEC28YIL076W YJR154WP47181 346 aa3.95□□□□□ -1.78
SEC28YIL076W LCL3P53153 274 aa3.95□□□□□ -1.78
SEC28YIL076W DRN1P53255 507 aaKnown RBP3.95□□□□□ -1.78
SEC28YIL076W SLD5Q03406 294 aa3.95□□□□□ -1.78
SEC28YIL076W SPE4Q12455 300 aa3.95□□□□□ -1.78
SEC28YIL076W POL4P25615 582 aa3.94□□□□□ -1.78
SEC28YIL076W SWH1P35845 1188 aa3.94□□□□□ -1.78
SEC28YIL076W TUL1P36096 758 aa3.94□□□□□ -1.78
SEC28YIL076W CIN4P39110 191 aa3.94□□□□□ -1.78
SEC28YIL076W SHO1P40073 367 aa3.94□□□□□ -1.78
SEC28YIL076W LYS14P40971 790 aa3.94□□□□□ -1.78
SEC28YIL076W MRPL51Q06090 140 aaPredicted RBP3.94□□□□□ -1.78
SEC28YIL076W YOR365CQ08844 703 aa3.94□□□□□ -1.78
SEC28YIL076W CHS3P29465 1165 aa3.93□□□□□ -1.78
SEC28YIL076W YHR210CP38893 341 aa3.93□□□□□ -1.78
SEC28YIL076W WSC2P53832 503 aa3.93□□□□□ -1.78
SEC28YIL076W IVY1Q04934 453 aa3.93□□□□□ -1.78
SEC28YIL076W YCL021W-AQ96VH3 125 aa3.93□□□□□ -1.78
SEC28YIL076W SGS1P35187 1447 aa3.93□□□□□ -1.78
SEC28YIL076W RAD52P06778 471 aaKnown RBP3.92□□□□□ -1.78
SEC28YIL076W ATR1P13090 542 aa3.92□□□□□ -1.78
SEC28YIL076W YCK1P23291 538 aa3.92□□□□□ -1.78
SEC28YIL076W YCR007CP25354 239 aa3.92□□□□□ -1.78
SEC28YIL076W YBL029WP38201 376 aa3.92□□□□□ -1.78
SEC28YIL076W ALG8P40351 577 aa3.92□□□□□ -1.78
SEC28YIL076W MEP3P53390 489 aa3.92□□□□□ -1.78
SEC28YIL076W IOC4Q04213 475 aa3.92□□□□□ -1.78
SEC28YIL076W FMP40Q08968 688 aaPredicted RBP3.92□□□□□ -1.78
SEC28YIL076W PEP4P07267 405 aaKnown RBP3.91□□□□□ -1.78
SEC28YIL076W MRP13P12686 339 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms