RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	YNL010W	P53981	241 aa	Known RBP	4.11	□□□□□ -1.75
TPA1	YER049W	SDH1	Q00711	640 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YMR321C	Q04898	105 aa		4.11	□□□□□ -1.75
TPA1	YER049W	GMC2	Q06201	188 aa		4.11	□□□□□ -1.75
TPA1	YER049W	SEC10	Q06245	871 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YLR413W	Q06689	675 aa		4.11	□□□□□ -1.75
TPA1	YER049W	YEH2	Q07950	538 aa		4.11	□□□□□ -1.75
TPA1	YER049W	MUM3	Q08750	479 aa		4.11	□□□□□ -1.75
TPA1	YER049W	CDC9	P04819	755 aa		4.1	□□□□□ -1.75
TPA1	YER049W	RHO1	P06780	209 aa	Known RBP	4.1	□□□□□ -1.75
TPA1	YER049W	BCY1	P07278	416 aa	Known RBP	4.1	□□□□□ -1.75
TPA1	YER049W	HEM1	P09950	548 aa	Predicted RBP	4.1	□□□□□ -1.75
TPA1	YER049W	PET122	P10355	254 aa		4.1	□□□□□ -1.75
TPA1	YER049W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
TPA1	YER049W	VMA2	P16140	517 aa	Known RBP	4.1	□□□□□ -1.75
TPA1	YER049W	UGA1	P17649	471 aa		4.1	□□□□□ -1.75
TPA1	YER049W	PMA2	P19657	947 aa		4.1	□□□□□ -1.75
TPA1	YER049W	ERG6	P25087	383 aa	Known RBP	4.1	□□□□□ -1.75
TPA1	YER049W	FUN30	P31380	1131 aa		4.1	□□□□□ -1.75
TPA1	YER049W	COQ2	P32378	372 aa		4.1	□□□□□ -1.75
TPA1	YER049W	SFP1	P32432	683 aa		4.1	□□□□□ -1.75
TPA1	YER049W	CYS4	P32582	507 aa	Known RBP	4.1	□□□□□ -1.75
TPA1	YER049W	RCN1	P36054	211 aa		4.1	□□□□□ -1.75
TPA1	YER049W	SKG1	P36169	355 aa		4.1	□□□□□ -1.75
TPA1	YER049W	IST2	P38250	946 aa		4.1	□□□□□ -1.75
TPA1	YER049W	HSL7	P38274	827 aa		4.1	□□□□□ -1.75
TPA1	YER049W	FTH1	P38310	465 aa		4.1	□□□□□ -1.75
TPA1	YER049W	SEO1	P39709	593 aa		4.1	□□□□□ -1.75
TPA1	YER049W	YEN1	P40028	759 aa		4.1	□□□□□ -1.75
TPA1	YER049W	YFL040W	P43562	540 aa		4.1	□□□□□ -1.75
TPA1	YER049W	STB2	P46679	850 aa		4.1	□□□□□ -1.75
TPA1	YER049W	YJL055W	P47044	245 aa		4.1	□□□□□ -1.75
TPA1	YER049W	RMR1	P53060	241 aa		4.1	□□□□□ -1.75
TPA1	YER049W	GPI1	P53306	609 aa		4.1	□□□□□ -1.75
TPA1	YER049W	VPS9	P54787	451 aa		4.1	□□□□□ -1.75
TPA1	YER049W	REX2	P54964	269 aa	Known RBP	4.1	□□□□□ -1.75
TPA1	YER049W	ECM9	Q02202	377 aa		4.1	□□□□□ -1.75
TPA1	YER049W	YPL034W	Q03083	165 aa		4.1	□□□□□ -1.75
TPA1	YER049W	SSQ1	Q05931	657 aa	Predicted RBP	4.1	□□□□□ -1.75
TPA1	YER049W	YDL073W	Q07454	984 aa		4.1	□□□□□ -1.75
TPA1	YER049W	YDL121C	Q07541	149 aa		4.1	□□□□□ -1.75
TPA1	YER049W	NBA1	Q08229	501 aa	Known RBP	4.1	□□□□□ -1.75
TPA1	YER049W	ESA1	Q08649	445 aa		4.1	□□□□□ -1.75
TPA1	YER049W	ATG34	Q12292	412 aa		4.1	□□□□□ -1.75
TPA1	YER049W	GCD1	P09032	578 aa	Predicted RBP	4.09	□□□□□ -1.75
TPA1	YER049W	FBA1	P14540	359 aa	Known RBP	4.09	□□□□□ -1.75
TPA1	YER049W	ATP12	P22135	325 aa		4.09	□□□□□ -1.75
TPA1	YER049W	SEC15	P22224	910 aa		4.09	□□□□□ -1.75
TPA1	YER049W	PRR1	P28708	518 aa		4.09	□□□□□ -1.75
TPA1	YER049W	VMA6	P32366	345 aa	Known RBP	4.09	□□□□□ -1.75
TPA1	YER049W	PAH1	P32567	862 aa		4.09	□□□□□ -1.75
TPA1	YER049W	TFB1	P32776	642 aa		4.09	□□□□□ -1.75
TPA1	YER049W	AIM26	P32858	118 aa		4.09	□□□□□ -1.75
TPA1	YER049W	PTC1	P35182	281 aa		4.09	□□□□□ -1.75
TPA1	YER049W	EMC3	P36039	253 aa		4.09	□□□□□ -1.75
TPA1	YER049W	BIT2	P38346	545 aa		4.09	□□□□□ -1.75
TPA1	YER049W	ETP1	P38748	585 aa	Known RBP	4.09	□□□□□ -1.75
TPA1	YER049W	AVT6	P40074	448 aa		4.09	□□□□□ -1.75
TPA1	YER049W	MGS1	P40151	587 aa		4.09	□□□□□ -1.75
TPA1	YER049W	IMA5	P40884	581 aa		4.09	□□□□□ -1.75
TPA1	YER049W	MSS2	P40990	351 aa		4.09	□□□□□ -1.75
TPA1	YER049W	MAF1	P41910	395 aa		4.09	□□□□□ -1.75
TPA1	YER049W	SWP82	P43554	623 aa		4.09	□□□□□ -1.75
TPA1	YER049W	MNN11	P46985	422 aa	Known RBP	4.09	□□□□□ -1.75
TPA1	YER049W	RPS7B	P48164	190 aa	Known RBP	4.09	□□□□□ -1.75
TPA1	YER049W	ALT2	P52892	507 aa		4.09	□□□□□ -1.75
TPA1	YER049W	AIF1	P52923	378 aa		4.09	□□□□□ -1.75
TPA1	YER049W	PEX31	P53203	462 aa		4.09	□□□□□ -1.75
TPA1	YER049W	YGR127W	P53275	312 aa		4.09	□□□□□ -1.75
TPA1	YER049W	YNL033W	P53964	284 aa		4.09	□□□□□ -1.75
TPA1	YER049W	YNL019C	P53975	284 aa		4.09	□□□□□ -1.75
TPA1	YER049W	SLU7	Q02775	382 aa	Known RBP	4.09	□□□□□ -1.75
TPA1	YER049W	ARP9	Q05123	467 aa		4.09	□□□□□ -1.75
TPA1	YER049W	HEL2	Q05580	639 aa	Known RBP	4.09	□□□□□ -1.75
TPA1	YER049W	ECM30	Q06673	1274 aa		4.09	□□□□□ -1.75
TPA1	YER049W	LOT6	Q07923	191 aa		4.09	□□□□□ -1.75
TPA1	YER049W	SPE3	Q12074	293 aa	Known RBP	4.09	□□□□□ -1.75
TPA1	YER049W	SVS1	Q12254	260 aa		4.09	□□□□□ -1.75
TPA1	YER049W	HER1	Q12276	1246 aa		4.09	□□□□□ -1.75
TPA1	YER049W	REP1	P03871	373 aa		4.09	□□□□□ -1.76
TPA1	YER049W	TPK2	P06245	380 aa		4.09	□□□□□ -1.76
TPA1	YER049W	RAP1	P11938	827 aa		4.09	□□□□□ -1.76
TPA1	YER049W	DBR1	P24309	405 aa	Known RBP	4.09	□□□□□ -1.76
TPA1	YER049W	CLB3	P24870	427 aa		4.09	□□□□□ -1.76
TPA1	YER049W	CTR86	P25355	563 aa		4.09	□□□□□ -1.76
TPA1	YER049W	DMC1	P25453	334 aa		4.09	□□□□□ -1.76
TPA1	YER049W	SSE2	P32590	693 aa	Known RBP	4.09	□□□□□ -1.76
TPA1	YER049W	FRE2	P36033	711 aa		4.09	□□□□□ -1.76
TPA1	YER049W	YPK3	P38070	525 aa		4.09	□□□□□ -1.76
TPA1	YER049W	AGP2	P38090	596 aa		4.09	□□□□□ -1.76
TPA1	YER049W	TDP1	P38319	544 aa		4.09	□□□□□ -1.76
TPA1	YER049W	PTC7	P38797	343 aa		4.09	□□□□□ -1.76
TPA1	YER049W	APE4	P38821	490 aa		4.09	□□□□□ -1.76
TPA1	YER049W	YJR061W	P40355	935 aa		4.09	□□□□□ -1.76
TPA1	YER049W	SYG1	P40528	902 aa		4.09	□□□□□ -1.76
TPA1	YER049W	GTS1	P40956	396 aa		4.09	□□□□□ -1.76
TPA1	YER049W	IMD4	P50094	524 aa	Known RBP	4.09	□□□□□ -1.76
TPA1	YER049W	PSP2	P50109	593 aa	Known RBP	4.09	□□□□□ -1.76
TPA1	YER049W	CIK1	Q01649	594 aa		4.09	□□□□□ -1.76
TPA1	YER049W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms