RNA–Protein interactions for RNA: YER011W

TIR1, Transcript of Cell wall mannoprotein, yeast

Gene TIR1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR1	YER011W	YPT35	P38815	214 aa	Known RBP	13.23	□□□□□ -0.29
TIR1	YER011W	ELO1	P39540	310 aa		13.23	□□□□□ -0.29
TIR1	YER011W	MRX1	P40050	688 aa		13.23	□□□□□ -0.29
TIR1	YER011W	YPS6	P40583	537 aa		13.23	□□□□□ -0.29
TIR1	YER011W	SSU1	P41930	458 aa		13.23	□□□□□ -0.29
TIR1	YER011W	ZIM17	P42844	174 aa		13.23	□□□□□ -0.29
TIR1	YER011W	GCV1	P48015	400 aa		13.23	□□□□□ -0.29
TIR1	YER011W	MDM34	P53083	459 aa		13.23	□□□□□ -0.29
TIR1	YER011W	SUN4	P53616	420 aa		13.23	□□□□□ -0.29
TIR1	YER011W	YPL109C	Q02981	657 aa		13.23	□□□□□ -0.29
TIR1	YER011W	VPS16	Q03308	798 aa		13.23	□□□□□ -0.29
TIR1	YER011W	PFA4	Q12006	378 aa		13.23	□□□□□ -0.29
TIR1	YER011W	RRP42	Q12277	265 aa	Predicted RBP	13.23	□□□□□ -0.29
TIR1	YER011W	RPS1A	P33442	255 aa	Known RBP	13.22	□□□□□ -0.29
TIR1	YER011W	YAL037W	P39728	267 aa		13.22	□□□□□ -0.29
TIR1	YER011W	CIS3	P47001	227 aa		13.22	□□□□□ -0.29
TIR1	YER011W	RNR4	P49723	345 aa	Known RBP	13.22	□□□□□ -0.29
TIR1	YER011W	NOP19	P53317	196 aa	Predicted RBP	13.22	□□□□□ -0.29
TIR1	YER011W	YMR034C	Q05131	434 aa	Predicted RBP	13.22	□□□□□ -0.29
TIR1	YER011W	RAD34	Q06665	692 aa		13.22	□□□□□ -0.29
TIR1	YER011W	GPB1	Q08886	897 aa		13.22	□□□□□ -0.29
TIR1	YER011W	MDM35	O60200	86 aa		13.21	□□□□□ -0.29
TIR1	YER011W	MGM101	P32787	269 aa	Known RBP	13.21	□□□□□ -0.29
TIR1	YER011W	COX13	P32799	129 aa		13.21	□□□□□ -0.29
TIR1	YER011W	PIM1	P36775	1133 aa		13.21	□□□□□ -0.29
TIR1	YER011W	INM1	P38710	295 aa		13.21	□□□□□ -0.29
TIR1	YER011W	SCS2	P40075	244 aa	Known RBP	13.21	□□□□□ -0.29
TIR1	YER011W	YJR030C	P47101	745 aa		13.21	□□□□□ -0.29
TIR1	YER011W	COS12	P53053	380 aa		13.21	□□□□□ -0.29
TIR1	YER011W	YNL260C	P53846	198 aa		13.21	□□□□□ -0.29
TIR1	YER011W	SUB1	P54000	292 aa	Known RBP	13.21	□□□□□ -0.29
TIR1	YER011W	YLR049C	Q12110	428 aa		13.21	□□□□□ -0.29
TIR1	YER011W	SRN2	Q99176	213 aa		13.21	□□□□□ -0.29
TIR1	YER011W	ARG1	P22768	420 aa		13.2	□□□□□ -0.3
TIR1	YER011W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	13.2	□□□□□ -0.3	not detected
TIR1	YER011W	TRM7	P38238	310 aa	Known RBP	13.2	□□□□□ -0.3
TIR1	YER011W	FKH2	P41813	862 aa		13.2	□□□□□ -0.3
TIR1	YER011W	GCD10	P41814	478 aa		13.2	□□□□□ -0.3
TIR1	YER011W	YFR020W	P43600	232 aa		13.2	□□□□□ -0.3
TIR1	YER011W	SUM1	P46676	1062 aa		13.2	□□□□□ -0.3
TIR1	YER011W	VHS1	Q03785	461 aa		13.2	□□□□□ -0.3
TIR1	YER011W	YML096W	Q04489	525 aa		13.2	□□□□□ -0.3
TIR1	YER011W	YDL121C	Q07541	149 aa		13.2	□□□□□ -0.3
TIR1	YER011W	ATG29	Q12092	213 aa		13.2	□□□□□ -0.3
TIR1	YER011W	RTK1	Q12100	620 aa	Predicted RBP	13.2	□□□□□ -0.3
TIR1	YER011W	RGT2	Q12300	763 aa		13.2	□□□□□ -0.3
TIR1	YER011W	SUL2	Q12325	893 aa		13.2	□□□□□ -0.3
TIR1	YER011W	GPR1	Q12361	961 aa		13.2	□□□□□ -0.3
TIR1	YER011W	HRP1	Q99383	534 aa	Known RBP	13.2	□□□□□ -0.3
TIR1	YER011W	COS2	P0CX12	379 aa		13.19	□□□□□ -0.3
TIR1	YER011W	COS3	P0CX13	379 aa		13.19	□□□□□ -0.3
TIR1	YER011W	TRM1	P15565	570 aa	Known RBP	13.19	□□□□□ -0.3
TIR1	YER011W	EXO70	P19658	623 aa		13.19	□□□□□ -0.3
TIR1	YER011W	BUB2	P26448	306 aa	Predicted RBP	13.19	□□□□□ -0.3
TIR1	YER011W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	13.19	□□□□□ -0.3	not detected
TIR1	YER011W	UTH1	P36135	365 aa		13.19	□□□□□ -0.3
TIR1	YER011W	DMA1	P38823	416 aa		13.19	□□□□□ -0.3
TIR1	YER011W	NDE1	P40215	560 aa		13.19	□□□□□ -0.3
TIR1	YER011W	COS4	P43542	379 aa		13.19	□□□□□ -0.3
TIR1	YER011W	CUS2	P53830	285 aa	Predicted RBP	13.19	□□□□□ -0.3
TIR1	YER011W	CTK1	Q03957	528 aa	Known RBP	13.19	□□□□□ -0.3
TIR1	YER011W	ATG34	Q12292	412 aa		13.19	□□□□□ -0.3
TIR1	YER011W	LTP1	P40347	161 aa		13.18	□□□□□ -0.3
TIR1	YER011W	MET18	P40469	1032 aa		13.18	□□□□□ -0.3
TIR1	YER011W	SEC27	P41811	889 aa	Known RBP	13.18	□□□□□ -0.3
TIR1	YER011W	YPT32	P51996	222 aa	Known RBP	13.18	□□□□□ -0.3
TIR1	YER011W	SGF73	P53165	657 aa		13.18	□□□□□ -0.3
TIR1	YER011W	YNL010W	P53981	241 aa	Known RBP	13.18	□□□□□ -0.3
TIR1	YER011W	IOC2	Q12072	812 aa		13.18	□□□□□ -0.3
TIR1	YER011W	YPR011C	Q12251	326 aa		13.18	□□□□□ -0.3
TIR1	YER011W	BRR1	Q99177	341 aa	Predicted RBP	13.18	□□□□□ -0.3
TIR1	YER011W	TRP3	P00937	484 aa		13.17	□□□□□ -0.3
TIR1	YER011W	AI3	P03877	415 aa		13.17	□□□□□ -0.3
TIR1	YER011W	SNF5	P18480	905 aa		13.17	□□□□□ -0.3
TIR1	YER011W	RMA1	P36001	430 aa	Known RBP	13.17	□□□□□ -0.3
TIR1	YER011W	NTR2	P36118	322 aa	Predicted RBP	13.17	□□□□□ -0.3
TIR1	YER011W	ERP5	P38819	212 aa		13.17	□□□□□ -0.3
TIR1	YER011W	HXT16	P47185	567 aa		13.17	□□□□□ -0.3
TIR1	YER011W	HXT15	P54854	567 aa		13.17	□□□□□ -0.3
TIR1	YER011W	EGD1	Q02642	157 aa	Known RBP	13.17	□□□□□ -0.3
TIR1	YER011W	FMN1	Q03778	218 aa		13.17	□□□□□ -0.3
TIR1	YER011W	ESA1	Q08649	445 aa		13.17	□□□□□ -0.3
TIR1	YER011W	RIB2	Q12362	591 aa	Known RBP	13.17	□□□□□ -0.3
TIR1	YER011W	CAR1	P00812	333 aa	Known RBP	13.16	□□□□□ -0.3
TIR1	YER011W	RDS2	P19541	446 aa	Known RBP	13.16	□□□□□ -0.3
TIR1	YER011W	OXP1	P28273	1286 aa		13.16	□□□□□ -0.3
TIR1	YER011W	PET309	P32522	965 aa	Predicted RBP	13.16	□□□□□ -0.3
TIR1	YER011W	CEM1	P39525	442 aa		13.16	□□□□□ -0.3
TIR1	YER011W	ARB1	P40024	610 aa	Known RBP	13.16	□□□□□ -0.3
TIR1	YER011W	YGL176C	P46945	554 aa		13.16	□□□□□ -0.3
TIR1	YER011W	REX2	P54964	269 aa	Known RBP	13.16	□□□□□ -0.3
TIR1	YER011W	LGE1	Q02796	332 aa	Known RBP	13.16	□□□□□ -0.3
TIR1	YER011W	YPL245W	Q12179	454 aa	Known RBP	13.16	□□□□□ -0.3
TIR1	YER011W	DBR1	P24309	405 aa	Known RBP	13.15	□□□□□ -0.3
TIR1	YER011W	HXT4	P32467	576 aa		13.15	□□□□□ -0.3
TIR1	YER011W	ARA1	P38115	344 aa		13.15	□□□□□ -0.3
TIR1	YER011W	BMT2	P38278	337 aa		13.15	□□□□□ -0.3
TIR1	YER011W	RFC3	P38629	340 aa		13.15	□□□□□ -0.3
TIR1	YER011W	HXT6	P39003	570 aa	Known RBP	13.15	□□□□□ -0.3
TIR1	YER011W	HXT7	P39004	570 aa		13.15	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms