RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W MAL33P38157 468 aa3.78□□□□□ -1.8
TSR1YDL060W VID24P38263 362 aa3.78□□□□□ -1.8
TSR1YDL060W SLZ1P40167 298 aa3.78□□□□□ -1.8
TSR1YDL060W SGN1P40561 250 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
TSR1YDL060W LYS4P49367 693 aaPredicted RBP3.78□□□□□ -1.8
TSR1YDL060W FMS1P50264 508 aa3.78□□□□□ -1.8
TSR1YDL060W ASE1P50275 885 aa3.78□□□□□ -1.8
TSR1YDL060W BOP3P53958 396 aa3.78□□□□□ -1.8
TSR1YDL060W ADA2Q02336 434 aa3.78□□□□□ -1.8
TSR1YDL060W YPL108WQ02872 168 aaPredicted RBP3.78□□□□□ -1.8
TSR1YDL060W MUB1Q03162 620 aa3.78□□□□□ -1.8
TSR1YDL060W ARR1Q06596 294 aa3.78□□□□□ -1.8
TSR1YDL060W ATG23Q06671 453 aa3.78□□□□□ -1.8
TSR1YDL060W CHS5Q12114 671 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W SGT2Q12118 346 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W RPN5Q12250 445 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W PSY3Q12318 242 aa3.78□□□□□ -1.8
TSR1YDL060W PNO1Q99216 274 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W MRPS28P21771 286 aa3.78□□□□□ -1.8
TSR1YDL060W CPR2P23285 205 aa3.78□□□□□ -1.8
TSR1YDL060W ADY2P25613 283 aa3.78□□□□□ -1.8
TSR1YDL060W GSY2P27472 705 aa3.78□□□□□ -1.8
TSR1YDL060W MCM4P30665 933 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W PEX2P32800 271 aa3.78□□□□□ -1.8
TSR1YDL060W LOS1P33418 1100 aaPredicted RBP3.78□□□□□ -1.8
TSR1YDL060W AUR1P36107 401 aaPredicted RBP3.78□□□□□ -1.8
TSR1YDL060W GMH1P36125 273 aa3.78□□□□□ -1.8
TSR1YDL060W CST26P38226 397 aa3.78□□□□□ -1.8
TSR1YDL060W YNG2P38806 282 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W SPT8P38915 602 aa3.78□□□□□ -1.8
TSR1YDL060W RIO2P40160 425 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W YIL161WP40449 235 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W APT1P49435 187 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W SPC98P53540 846 aa3.78□□□□□ -1.8
TSR1YDL060W SNF12P53628 566 aa3.78□□□□□ -1.8
TSR1YDL060W ALF1P53904 254 aa3.78□□□□□ -1.8
TSR1YDL060W EFR3Q03653 782 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W YDL086WQ07505 273 aa3.78□□□□□ -1.8
TSR1YDL060W YEH1Q07804 573 aa3.78□□□□□ -1.8
TSR1YDL060W MLH2Q07980 695 aa3.78□□□□□ -1.8
TSR1YDL060W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
TSR1YDL060W RUD3Q12234 484 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W ERG27Q12452 347 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W YJR112W-AQ3E743 109 aa3.78□□□□□ -1.8
TSR1YDL060W SPB1P25582 841 aaPredicted RBP3.77□□□□□ -1.81
TSR1YDL060W FUB1P25659 250 aa3.77□□□□□ -1.81
TSR1YDL060W SWC3P31376 625 aa3.77□□□□□ -1.81
TSR1YDL060W GCD7P32502 381 aaPredicted RBP3.77□□□□□ -1.81
TSR1YDL060W MRE11P32829 692 aa3.77□□□□□ -1.81
TSR1YDL060W GEX2P36173 615 aa3.77□□□□□ -1.81
TSR1YDL060W FZO1P38297 855 aa3.77□□□□□ -1.81
TSR1YDL060W PIH1P38768 344 aa3.77□□□□□ -1.81
TSR1YDL060W SEC27P41811 889 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W CCT7P42943 550 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W YGR151CP53287 111 aa3.77□□□□□ -1.81
TSR1YDL060W ERV25P54837 211 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W YMR111CQ04461 462 aaPredicted RBP3.77□□□□□ -1.81
TSR1YDL060W SWA2Q06677 668 aa3.77□□□□□ -1.81
TSR1YDL060W BUD7Q08754 746 aa3.77□□□□□ -1.81
TSR1YDL060W AIM41Q12032 185 aa3.77□□□□□ -1.81
TSR1YDL060W YOR019WQ99248 730 aa3.77□□□□□ -1.81
TSR1YDL060W YPT6Q99260 215 aa3.77□□□□□ -1.81
TSR1YDL060W RRP5Q05022 1729 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W YMR084WA2P2R3 262 aa3.77□□□□□ -1.81
TSR1YDL060W TUF1P02992 437 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W FEN2P25621 512 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W KES1P35844 434 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W MUP3P38734 546 aa3.77□□□□□ -1.81
TSR1YDL060W CCT4P39078 528 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W OSW5P40219 148 aa3.77□□□□□ -1.81
TSR1YDL060W YIL077CP40508 320 aa3.77□□□□□ -1.81
TSR1YDL060W VMA13P41807 478 aaKnown RBP3.77□□□□□ -1.81
TSR1YDL060W COS12P53053 380 aa3.77□□□□□ -1.81
TSR1YDL060W ATG26Q06321 1198 aa3.77□□□□□ -1.81
TSR1YDL060W LUC7Q07508 261 aaPredicted RBP3.77□□□□□ -1.81
TSR1YDL060W PML1Q07930 204 aaPredicted RBP3.77□□□□□ -1.81
TSR1YDL060W SUT2Q12286 268 aa3.77□□□□□ -1.81
TSR1YDL060W DFR1P07807 211 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
TSR1YDL060W APL3P38065 1025 aa3.76□□□□□ -1.81
TSR1YDL060W ADH5P38113 351 aaKnown RBP3.76□□□□□ -1.81
TSR1YDL060W SPP381P38282 291 aaPredicted RBP3.76□□□□□ -1.81
TSR1YDL060W YHR054CP38780 354 aa3.76□□□□□ -1.81
TSR1YDL060W PRO2P54885 456 aaKnown RBP3.76□□□□□ -1.81
TSR1YDL060W RPA49Q01080 415 aaPredicted RBP3.76□□□□□ -1.81
TSR1YDL060W YML037CQ03703 340 aa3.76□□□□□ -1.81
TSR1YDL060W INP2Q03824 705 aa3.76□□□□□ -1.81
TSR1YDL060W PLP1Q04004 230 aa3.76□□□□□ -1.81
TSR1YDL060W RAD33Q04231 177 aa3.76□□□□□ -1.81
TSR1YDL060W TAF9Q05027 157 aa3.76□□□□□ -1.81
TSR1YDL060W MRD1Q06106 887 aaKnown RBP3.76□□□□□ -1.81
TSR1YDL060W SIR4P11978 1358 aa3.76□□□□□ -1.81
TSR1YDL060W ADE6P38972 1358 aaKnown RBP3.76□□□□□ -1.81
TSR1YDL060W ARG4P04076 463 aaPredicted RBP3.76□□□□□ -1.81
TSR1YDL060W CDC37P06101 506 aaKnown RBP3.76□□□□□ -1.81
TSR1YDL060W YML002WP0CF17 737 aa3.76□□□□□ -1.81
TSR1YDL060W RPO26P20435 155 aa3.76□□□□□ -1.81
TSR1YDL060W YBR062CP38239 180 aa3.76□□□□□ -1.81
TSR1YDL060W CCT6P39079 546 aa3.76□□□□□ -1.81
TSR1YDL060W BUD16P39988 312 aa3.76□□□□□ -1.81
TSR1YDL060W YGL036WP53185 909 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms