RNA–Protein interactions for RNA: YDL001W

RMD1, Transcript of Cytoplasmic protein required for sporulation, yeast

Gene RMD1, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RMD1	YDL001W	MRP13	P12686	339 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	YAP1	P19880	650 aa	Known RBP	4.89	□□□□□ -1.63
RMD1	YDL001W	CNA1	P23287	553 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	CLB2	P24869	491 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	ROX1	P25042	368 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	SYN8	P31377	255 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	YBR144C	P34215	104 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	STV1	P37296	890 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	ICS2	P38284	255 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	TSC10	P38342	320 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	XBP1	P40489	647 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	IMD4	P50094	524 aa	Known RBP	4.89	□□□□□ -1.63
RMD1	YDL001W	COP1	P53622	1201 aa	Known RBP	4.89	□□□□□ -1.63
RMD1	YDL001W	GIR2	Q03768	265 aa	Predicted RBP	4.89	□□□□□ -1.63
RMD1	YDL001W	YDR239C	Q03780	787 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	SEG1	Q04279	960 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	NDJ1	Q12366	352 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	KRS1	P15180	591 aa	Known RBP	4.88	□□□□□ -1.63
RMD1	YDL001W	PDA1	P16387	420 aa	Known RBP	4.88	□□□□□ -1.63
RMD1	YDL001W	PUP3	P25451	205 aa	Known RBP	4.88	□□□□□ -1.63
RMD1	YDL001W	TIF3	P34167	436 aa	Known RBP	4.88	□□□□□ -1.63
RMD1	YDL001W	YBL055C	P34220	418 aa	Predicted RBP	4.88	□□□□□ -1.63
RMD1	YDL001W	FLO5	P38894	1075 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	VPS41	P38959	992 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	YIL024C	P40543	189 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	MET28	P40573	187 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	SGF73	P53165	657 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	COQ11	Q05892	277 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	RIM20	Q12033	661 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	RLM1	Q12224	676 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	CRC1	Q12289	327 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	RTN2	Q12443	393 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	AVL9	Q12500	764 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	TAD3	Q9URQ3	322 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	PSK1	P31374	1356 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	EDE1	P34216	1381 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	RAV1	P47104	1357 aa		4.88	□□□□□ -1.63
RMD1	YDL001W	ARG81	P05085	880 aa		4.87	□□□□□ -1.63
RMD1	YDL001W	BOS1	P25385	244 aa		4.87	□□□□□ -1.63
RMD1	YDL001W	GPI10	P30777	616 aa		4.87	□□□□□ -1.63
RMD1	YDL001W	TCD2	P36101	447 aa	Known RBP	4.87	□□□□□ -1.63
RMD1	YDL001W	SCO2	P38072	301 aa		4.87	□□□□□ -1.63
RMD1	YDL001W	CST26	P38226	397 aa		4.87	□□□□□ -1.63
RMD1	YDL001W	GPD2	P41911	440 aa	Known RBP	4.87	□□□□□ -1.63
RMD1	YDL001W	VPS25	P47142	202 aa		4.87	□□□□□ -1.63
RMD1	YDL001W	YPT11	P48559	417 aa		4.87	□□□□□ -1.63
RMD1	YDL001W	HOS2	P53096	452 aa	Predicted RBP	4.87	□□□□□ -1.63
RMD1	YDL001W	ERG26	P53199	349 aa	Known RBP	4.87	□□□□□ -1.63
RMD1	YDL001W	EAF7	P53911	425 aa	Known RBP	4.87	□□□□□ -1.63
RMD1	YDL001W	RPC11	Q04307	110 aa	Predicted RBP	4.87	□□□□□ -1.63
RMD1	YDL001W	RTT109	Q07794	436 aa		4.87	□□□□□ -1.63
RMD1	YDL001W	IKI3	Q06706	1349 aa	Known RBP	4.87	□□□□□ -1.63
RMD1	YDL001W	RPB8	P20436	146 aa		4.86	□□□□□ -1.63
RMD1	YDL001W	ERG3	P32353	365 aa		4.86	□□□□□ -1.63
RMD1	YDL001W	MIA40	P36046	403 aa		4.86	□□□□□ -1.63
RMD1	YDL001W	NUP133	P36161	1157 aa		4.86	□□□□□ -1.63
RMD1	YDL001W	ULP2	P40537	1034 aa	Predicted RBP	4.86	□□□□□ -1.63
RMD1	YDL001W	PET130	P47065	347 aa		4.86	□□□□□ -1.63
RMD1	YDL001W	RSM23	Q01163	450 aa		4.86	□□□□□ -1.63
RMD1	YDL001W	YMR155W	Q03795	547 aa		4.86	□□□□□ -1.63
RMD1	YDL001W	ATG26	Q06321	1198 aa		4.86	□□□□□ -1.63
RMD1	YDL001W	RPS10A	Q08745	105 aa	Predicted RBP	4.86	□□□□□ -1.63
RMD1	YDL001W	ROM2	P51862	1356 aa	Known RBP	4.86	□□□□□ -1.63
RMD1	YDL001W	ART10	P18634	518 aa	Known RBP	4.85	□□□□□ -1.63
RMD1	YDL001W	BYE1	P36106	594 aa		4.85	□□□□□ -1.63
RMD1	YDL001W	RPL32	P38061	130 aa	Known RBP	4.85	□□□□□ -1.63
RMD1	YDL001W	VID24	P38263	362 aa		4.85	□□□□□ -1.63
RMD1	YDL001W	MET18	P40469	1032 aa		4.85	□□□□□ -1.63
RMD1	YDL001W	YIL060W	P40519	144 aa		4.85	□□□□□ -1.63
RMD1	YDL001W	PSA1	P41940	361 aa	Known RBP	4.85	□□□□□ -1.63
RMD1	YDL001W	RPS10B	P46784	105 aa	Known RBP	4.85	□□□□□ -1.63
RMD1	YDL001W	LYS20	P48570	428 aa	Known RBP	4.85	□□□□□ -1.63
RMD1	YDL001W	APT1	P49435	187 aa	Known RBP	4.85	□□□□□ -1.63
RMD1	YDL001W	ADE13	Q05911	482 aa	Known RBP	4.85	□□□□□ -1.63
RMD1	YDL001W	MCP2	Q06567	569 aa		4.85	□□□□□ -1.63
RMD1	YDL001W	PGA3	Q12746	312 aa	Known RBP	4.85	□□□□□ -1.63
RMD1	YDL001W	URB1	P34241	1764 aa	Known RBP	4.84	□□□□□ -1.63
RMD1	YDL001W	YML133C	Q03099	1374 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	YLL067C	Q07888	1374 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	YLL066C	Q99208	1374 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	YME1	P32795	747 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	WBP1	P33767	430 aa	Known RBP	4.84	□□□□□ -1.63
RMD1	YDL001W	YKL100C	P34248	587 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	MUM2	P38236	366 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	CFD1	P40558	293 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	ROK1	P45818	564 aa	Predicted RBP	4.84	□□□□□ -1.63
RMD1	YDL001W	YDL218W	Q07629	317 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	ATG29	Q12092	213 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	YLR112W	Q12130	139 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	SFI1	Q12369	946 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	GRX6	Q12438	231 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	ERP4	Q12450	207 aa		4.84	□□□□□ -1.63
RMD1	YDL001W	SNF3	P10870	884 aa		4.83	□□□□□ -1.64
RMD1	YDL001W	HXT9	P40885	567 aa		4.83	□□□□□ -1.64
RMD1	YDL001W	DUG3	P53871	357 aa		4.83	□□□□□ -1.64
RMD1	YDL001W	BOP3	P53958	396 aa		4.83	□□□□□ -1.64
RMD1	YDL001W	VTC3	Q02725	835 aa		4.83	□□□□□ -1.64
RMD1	YDL001W	MRD1	Q06106	887 aa	Known RBP	4.83	□□□□□ -1.64
RMD1	YDL001W	POS5	Q06892	414 aa		4.83	□□□□□ -1.64
RMD1	YDL001W	RDR1	Q08904	546 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms