RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TRIM54Q9BYV2 358 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 CCNB2O95067 398 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 BSPRYQ5W0U4 402 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 CCDC25Q86WR0 208 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 INO80B-WBP1J3KQ70 363 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 CHEK2O96017 543 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 NPR1P16066 1061 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 DDX25Q9UHL0 483 aaKnown RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 PSMD14O00487 310 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 IFNLR1Q8IU57 520 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 FGD4Q96M96 766 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 RAB20Q9NX57 234 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 ARPP21Q9UBL0 812 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 SPACA6W5XKT8 324 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 GNA14O95837 355 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 RPLP2P05387 115 aaKnown RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 RALAP11233 206 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 PAX3P23760 479 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 HNRNPH2P55795 449 aaKnown RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 COLEC12Q5KU26 742 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 NEUROD4Q9HD90 331 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 PAMP19021 973 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 ICA1Q05084 483 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 SCYL2Q6P3W7 929 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 TRIM42Q8IWZ5 723 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 STX19Q8N4C7 294 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 CCDC17Q96LX7 622 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 SLC38A10Q9HBR0 1119 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 LAMC3Q9Y6N6 1575 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 DNAJC8O75937 253 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 ACAP3Q96P50 834 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 DRC3Q9H069 523 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 DISC1Q9NRI5 854 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 MIS18AQ9NYP9 233 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 SEPT9Q9UHD8 586 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 OPLAHO14841 1288 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 ZNF189O75820 626 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-205ENST00000623535 TTC4O95801 387 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 KLC3Q6P597 504 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 PGBD4Q96DM1 585 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 SPATA16Q9BXB7 569 aa6.86□□□□□ -1.31
CDKL5-205ENST00000623535 TBC1D8O95759 1140 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 CALCRLQ16602 461 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 TTC23Q5W5X9 447 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 SENP2Q9HC62 589 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 ATP8A2Q9NTI2 1148 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 GOLGA8JA6NMD2 632 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 H3BUI4 141 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 KCNA6P17658 529 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 CCNG2Q16589 344 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 MIGA1Q8NAN2 632 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 UTP11Q9Y3A2 253 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 PPP2R1AP30153 589 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 MTERF2Q49AM1 385 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 KANK4Q5T7N3 995 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 MMS22LQ6ZRQ5 1243 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 ZNF438Q7Z4V0 828 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 ARRDC4Q8NCT1 418 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 STKLD1Q8NE28 680 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 TSR2Q969E8 191 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 THAP12O43422 761 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 VCLP18206 1134 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 NEDD9Q14511 834 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 PSMD6Q15008 389 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 CEP57Q86XR8 500 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 SPATA17Q96L03 361 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 DHX29Q7Z478 1369 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 SOS1Q07889 1333 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 RARBP10826 455 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 CEP68Q76N32 757 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 SOS2Q07890 1332 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 PI4KAP2A4QPH2 592 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 AFMP43652 599 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 TTLL4Q14679 1199 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 DHX32Q7L7V1 743 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 PI4KAP1Q8N8J0 262 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 THG1LQ9NWX6 298 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 TWF2Q6IBS0 349 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 REXO1Q8N1G1 1221 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 LRRC46Q96FV0 321 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 SMARCAD1Q9H4L7 1026 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 JAG2Q9Y219 1238 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 FGD6Q6ZV73 1430 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 NDUFB5O43674 189 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 COG7P83436 770 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 CEP55Q53EZ4 464 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 INTS8Q75QN2 995 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 STX18Q9P2W9 335 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 FPGT-TNNI3KV9GXZ4 949 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 MYO1DO94832 1006 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 DEKP35659 375 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 STX1BP61266 288 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 NFX1Q12986 1120 aaKnown RBP6.85□□□□□ -1.31
CDKL5-205ENST00000623535 DBN1Q16643 649 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 KCNK9Q9NPC2 374 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 RIPOR2Q9Y4F9 1068 aa6.85□□□□□ -1.31
CDKL5-205ENST00000623535 ARHGAP10A1A4S6 786 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 SCG2P13521 617 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms