RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 NBPF4Q96M43 638 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 FCRL3Q96P31 734 aaPredicted RBP5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 CDADC1Q9BWV3 514 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 AP5S1Q9NUS5 200 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 CGGBP1Q9UFW8 167 aaPredicted RBP5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 PAPLNO95428 1278 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 HPXP02790 462 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 GSTM1P09488 218 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 JUNBP17275 347 aaPredicted RBP5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 ERVFC1P60507 584 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 SV2CQ496J9 727 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 FYB2Q5VWT5 728 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 EEPD1Q7L9B9 569 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 SPPL2CQ8IUH8 684 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 PPP1R14AQ96A00 147 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 SP110Q9HB58 689 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 EMC9Q9Y3B6 208 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 EFCAB5A4FU69 1503 aa5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 EPRSP07814 1512 aaKnown RBP5.53□□□□□ -1.52
CKS1BP3-201ENST00000600888 KDM6BO15054 1643 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 RAPGEF6Q8TEU7 1601 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 NOP56O00567 594 aaKnown RBP5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 U2SURPO15042 1029 aaKnown RBP5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 CD3EP07766 207 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 RAC2P15153 192 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 IFNGR1P15260 489 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 KIR2DL1P43626 348 aaPredicted RBP5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 KIR2DL2P43627 348 aaPredicted RBP5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 AMPD2Q01433 879 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 GRB10Q13322 594 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 DPY19L1Q2PZI1 675 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 MCTP1Q6DN14 999 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 POMZP3Q6PJE2 187 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 ANKS4BQ8N8V4 417 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 MYLIPQ8WY64 445 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 KIRREL1Q96J84 757 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 MAP6Q96JE9 813 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 HHIPL1Q96JK4 782 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 FCRL2Q96LA5 508 aaPredicted RBP5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 MRGPRX3Q96LB0 322 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 DRC1Q96MC2 740 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 MCMBPQ9BTE3 642 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 EPN3Q9H201 632 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
CKS1BP3-201ENST00000600888 WDR7Q9Y4E6 1490 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 FITM1A5D6W6 292 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 FADS2P1A8MWK0 482 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 AURKAO14965 403 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 KCNH1O95259 989 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 TRHRP34981 398 aaPredicted RBP5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 CHRNEQ04844 493 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 NR0B2Q15466 257 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 SOGA3Q5TF21 947 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 FAM9AQ8IZU1 332 aaPredicted RBP5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 CRACR2BQ8N4Y2 399 aaPredicted RBP5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 TMEM52Q8NDY8 209 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 ABHD4Q8TB40 342 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 LGR4Q9BXB1 951 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 C19orf44Q9H6X5 657 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 ERVK13-1Q9NX77 482 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 SIRPGQ9P1W8 387 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 LRP2BPQ9P2M1 347 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 MSRB2Q9Y3D2 182 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 TEX14Q8IWB6 1497 aa5.51□□□□□ -1.53
CKS1BP3-201ENST00000600888 TTBK1Q5TCY1 1321 aaPredicted RBP5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 NOTOA8MTQ0 251 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 FGF10O15520 208 aaPredicted RBP5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 USP2O75604 605 aaPredicted RBP5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 ITGAVP06756 1048 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 CEBPAP49715 358 aaPredicted RBP5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 SERINC3Q13530 473 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 SLC14A2Q15849 920 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 SLC10A6Q3KNW5 377 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 TIGD5Q53EQ6 642 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 TMEM67Q5HYA8 995 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 CEP128Q6ZU80 1094 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 ZSWIM9Q86XI8 627 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 TRIM59Q8IWR1 403 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 LILRA2Q8N149 483 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 FAM168AQ92567 244 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 ASIC4Q96FT7 647 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 DNAJC2Q99543 621 aaKnown RBP5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 CCDC113Q9H0I3 377 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 GPR55Q9Y2T6 319 aaPredicted RBP5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 ATP10BO94823 1461 aa5.5□□□□□ -1.53
CKS1BP3-201ENST00000600888 MAGI3Q5TCQ9 1506 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 ABCA9Q8IUA7 1624 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 C2orf71A6NGG8 1288 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 STXBP3O00186 592 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 AGRPO00253 132 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 PSPNO60542 156 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 RTP1P59025 263 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 SNX17Q15036 470 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 KCNMB1Q16558 191 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 EEF1DP3Q658K8 133 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 GTF2IRD2BQ6EKJ0 949 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 RCSD1Q6JBY9 416 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 GTF2IRD2Q86UP8 949 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 ZNF227Q86WZ6 799 aa5.49□□□□□ -1.53
CKS1BP3-201ENST00000600888 NAT16Q8N8M0 369 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms