RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SSRP1Q08945 709 aaKnown RBP22.63■■□□□ 1.21
CIRBP-220ENST00000588917 FUT2Q10981 343 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 SCRN1Q12765 414 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 GPR142Q7Z601 462 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 TRIM47Q96LD4 638 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 RNF26Q9BY78 433 aaPredicted RBP22.63■■□□□ 1.21
CIRBP-220ENST00000588917 ACAD9Q9H845 621 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 NCOA5Q9HCD5 579 aaKnown RBP22.63■■□□□ 1.21
CIRBP-220ENST00000588917 RIPK3Q9Y572 518 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 PCDHA1Q9Y5I3 950 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 PARP14Q460N5 1801 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 HTTP42858 3142 aa22.63■■□□□ 1.21
CIRBP-220ENST00000588917 A0A0G2JMZ2 1700 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 SLC15A5A6NIM6 579 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 hCG_1984214I3L0E3 225 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 PTPREP23469 700 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 KCTD2Q14681 263 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 NTRK3Q16288 839 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 SLC35G1Q2M3R5 365 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.62■■□□□ 1.21
CIRBP-220ENST00000588917 MCF2L2Q86YR7 1114 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 ZNF713Q8N859 430 aaPredicted RBP22.62■■□□□ 1.21
CIRBP-220ENST00000588917 GTF3C6Q969F1 213 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 RNF146Q9NTX7 359 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 SLC5A4Q9NY91 659 aa22.62■■□□□ 1.21
CIRBP-220ENST00000588917 USH1GQ495M9 461 aa22.61■■□□□ 1.21
CIRBP-220ENST00000588917 ANKRD35Q8N283 1001 aa22.61■■□□□ 1.21
CIRBP-220ENST00000588917 SAMD3Q8N6K7 520 aa22.61■■□□□ 1.21
CIRBP-220ENST00000588917 RGS22Q8NE09 1264 aa22.61■■□□□ 1.21
CIRBP-220ENST00000588917 SOCS4Q8WXH5 440 aa22.61■■□□□ 1.21
CIRBP-220ENST00000588917 PIBF1Q8WXW3 757 aa22.61■■□□□ 1.21
CIRBP-220ENST00000588917 NUDT12Q9BQG2 462 aa22.61■■□□□ 1.21
CIRBP-220ENST00000588917 CNTNAP5Q8WYK1 1306 aa22.6■■□□□ 1.21
CIRBP-220ENST00000588917 NECAB1Q8N987 351 aa22.6■■□□□ 1.21
CIRBP-220ENST00000588917 ARMC5Q96C12 935 aa22.6■■□□□ 1.21
CIRBP-220ENST00000588917 DDX11Q96FC9 970 aa22.6■■□□□ 1.21
CIRBP-220ENST00000588917 MMP19Q99542 508 aa22.6■■□□□ 1.21
CIRBP-220ENST00000588917 LLPHQ9BRT6 129 aaKnown RBP22.6■■□□□ 1.21
CIRBP-220ENST00000588917 ARHGAP39Q9C0H5 1083 aa22.6■■□□□ 1.21
CIRBP-220ENST00000588917 HOMER2Q9NSB8 354 aa22.6■■□□□ 1.21
CIRBP-220ENST00000588917 MAP3K20Q9NYL2 800 aaKnown RBP22.6■■□□□ 1.21
CIRBP-220ENST00000588917 SRRDQ9UH36 339 aa22.6■■□□□ 1.21
CIRBP-220ENST00000588917 POTEFA5A3E0 1075 aa22.59■■□□□ 1.21
CIRBP-220ENST00000588917 SLC26A6Q9BXS9 759 aa22.59■■□□□ 1.21
CIRBP-220ENST00000588917 PFASO15067 1338 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 DEXIO95424 95 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 CTGFP29279 349 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 CAP1Q01518 475 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 GRB14Q14449 540 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 PFKFB3Q16875 520 aaPredicted RBP22.58■■□□□ 1.21
CIRBP-220ENST00000588917 MORN1Q5T089 497 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 DPP9Q86TI2 863 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 TEX2Q8IWB9 1127 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 CCDC12Q8WUD4 166 aaPredicted RBP22.58■■□□□ 1.21
CIRBP-220ENST00000588917 PHKBQ93100 1093 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 GJD2Q9UKL4 321 aa22.58■■□□□ 1.21
CIRBP-220ENST00000588917 PPP1R11O60927 126 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-220ENST00000588917 ECM2O94769 699 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-220ENST00000588917 LARGE1O95461 756 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 SCG2P13521 617 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 RGS2P41220 211 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 MAP2K5Q13163 448 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 HEATR3Q7Z4Q2 680 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 WASF1Q92558 559 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 SNX21Q969T3 373 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 TMX3Q96JJ7 454 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 GLT8D2Q9H1C3 349 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 PCDH10Q9P2E7 1040 aa22.57■■□□□ 1.2
CIRBP-220ENST00000588917 COL11A1P12107 1806 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-220ENST00000588917 hCG_1642624A0A1W2PR95 340 aa22.56■■□□□ 1.2
CIRBP-220ENST00000588917 XRCC5P13010 732 aaKnown RBP22.56■■□□□ 1.2
CIRBP-220ENST00000588917 ADORA2AP29274 412 aa22.56■■□□□ 1.2
CIRBP-220ENST00000588917 IRF5Q13568 498 aa22.56■■□□□ 1.2
CIRBP-220ENST00000588917 MUM1L1Q5H9M0 696 aa22.56■■□□□ 1.2
CIRBP-220ENST00000588917 TRMT44Q8IYL2 757 aaKnown RBP22.56■■□□□ 1.2
CIRBP-220ENST00000588917 FAM177A1Q8N128 213 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-220ENST00000588917 CLEC4DQ8WXI8 215 aa22.56■■□□□ 1.2
CIRBP-220ENST00000588917 BARHL2Q9NY43 387 aa22.56■■□□□ 1.2
CIRBP-220ENST00000588917 DIS3Q9Y2L1 958 aaKnown RBP22.56■■□□□ 1.2
CIRBP-220ENST00000588917 STK36Q9NRP7 1315 aa22.56■■□□□ 1.2
CIRBP-220ENST00000588917 CENPFP49454 3210 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 XBP1P17861 261 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 FLT3LGP49771 235 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 PPP1R18Q6NYC8 613 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 NSMFQ6X4W1 530 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 RNF207Q6ZRF8 634 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 CCDC83Q8IWF9 413 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 RAET1EQ8TD07 263 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 USP6NLQ92738 828 aa22.55■■□□□ 1.2
CIRBP-220ENST00000588917 NFIBO00712 420 aa22.54■■□□□ 1.2
CIRBP-220ENST00000588917 CD2BP2O95400 341 aaKnown RBP22.54■■□□□ 1.2
CIRBP-220ENST00000588917 HOXC6P09630 235 aa22.54■■□□□ 1.2
CIRBP-220ENST00000588917 HMGN5P82970 282 aaKnown RBP22.54■■□□□ 1.2
CIRBP-220ENST00000588917 PRKCZQ05513 592 aa22.54■■□□□ 1.2
CIRBP-220ENST00000588917 TMEM106CQ9BVX2 250 aa22.54■■□□□ 1.2
CIRBP-220ENST00000588917 A1CFQ9NQ94 594 aaKnown RBP22.54■■□□□ 1.2
CIRBP-220ENST00000588917 SH3GLB2Q9NR46 395 aa22.54■■□□□ 1.2
CIRBP-220ENST00000588917 CYP39A1Q9NYL5 469 aa22.54■■□□□ 1.2
CIRBP-220ENST00000588917 PTPDC1A2A3K4 754 aa22.53■■□□□ 1.2
CIRBP-220ENST00000588917 POTEB2H3BUK9 544 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms