RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 MAP3K20Q9NYL2 800 aaKnown RBP19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 RBPJLQ9UBG7 517 aa19.53■□□□□ 0.72
SCAMP4-211ENST00000588907 PPP1R11O60927 126 aaPredicted RBP19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 PPFIA3O75145 1194 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 CRHR2Q13324 411 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 SAFBQ15424 915 aaKnown RBP eCLIP19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 USH1GQ495M9 461 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 LARP1BQ659C4 914 aaKnown RBP19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 MCTP2Q6DN12 878 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 ANKRD13CQ8N6S4 541 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 BEGAINQ9BUH8 593 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 MROH8Q9H579 483 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 C6orf50Q9HD87 102 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 BTBD7Q9P203 1132 aa19.52■□□□□ 0.72
SCAMP4-211ENST00000588907 H3BQV1 296 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 CNMDO75829 334 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 BCRP11274 1271 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 ALAS1P13196 640 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 MRPL12P52815 198 aaKnown RBP19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 SNAP25P60880 206 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 IFFO2Q5TF58 517 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 CCAR1Q8IX12 1150 aaKnown RBP19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 FBXO18Q8NFZ0 1043 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 GPKOWQ92917 476 aaPredicted RBP eCLIP19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 CUL5Q93034 780 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 AGBL1Q96MI9 1066 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 ZMYND12Q9H0C1 365 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 ACAD9Q9H845 621 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
SCAMP4-211ENST00000588907 ADCY7P51828 1080 aa19.5■□□□□ 0.71
SCAMP4-211ENST00000588907 NLRP5P59047 1200 aa19.5■□□□□ 0.71
SCAMP4-211ENST00000588907 C17orf99Q6UX52 265 aa19.5■□□□□ 0.71
SCAMP4-211ENST00000588907 COA7Q96BR5 231 aa19.5■□□□□ 0.71
SCAMP4-211ENST00000588907 TRERF1Q96PN7 1200 aa19.5■□□□□ 0.71
SCAMP4-211ENST00000588907 TXNRD2Q9NNW7 524 aa19.5■□□□□ 0.71
SCAMP4-211ENST00000588907 RNF146Q9NTX7 359 aa19.5■□□□□ 0.71
SCAMP4-211ENST00000588907 VPS54Q9P1Q0 977 aa19.5■□□□□ 0.71
SCAMP4-211ENST00000588907 RBBP6Q7Z6E9 1792 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 MAPK4P31152 587 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 GHRHRQ02643 423 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 DAGLBQ8NCG7 672 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 AIFM3Q96NN9 605 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 PHF20Q9BVI0 1012 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 MOV10L1Q9BXT6 1211 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 PSTPIP2Q9H939 334 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 RIC8AQ9NPQ8 531 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 RNF186Q9NXI6 227 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 PFASO15067 1338 aa19.49■□□□□ 0.71
SCAMP4-211ENST00000588907 SMCO2A6NFE2 343 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 PIK3CDO00329 1044 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 MMP1P03956 469 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 NOM1Q5C9Z4 860 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 KRT40Q6A162 431 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 POTEEQ6S8J3 1075 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 NCAPG2Q86XI2 1143 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 SPRYD3Q8NCJ5 442 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 CPA4Q9UI42 421 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 CIZ1Q9ULV3 898 aaPredicted RBP19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 PCDHA4Q9UN74 947 aa19.48■□□□□ 0.71
SCAMP4-211ENST00000588907 STX6O43752 255 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 STRNO43815 780 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 ERCC3P19447 782 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 SYT1P21579 422 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 KRT2P35908 639 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 SLC4A3P48751 1232 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 TYW1BQ6NUM6 668 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 ABRAQ8N0Z2 381 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 HOMER2Q9NSB8 354 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 IVNS1ABPQ9Y6Y0 642 aa19.47■□□□□ 0.71
SCAMP4-211ENST00000588907 GCOM1H8Y6P7 765 aaPredicted RBP19.46■□□□□ 0.71
SCAMP4-211ENST00000588907 FOSP01100 380 aaPredicted RBP19.46■□□□□ 0.71
SCAMP4-211ENST00000588907 POLR2MP0CAP2 368 aa19.46■□□□□ 0.71
SCAMP4-211ENST00000588907 AP3B2Q13367 1082 aa19.46■□□□□ 0.71
SCAMP4-211ENST00000588907 REXO1Q8N1G1 1221 aaKnown RBP19.46■□□□□ 0.71
SCAMP4-211ENST00000588907 CLEC4DQ8WXI8 215 aa19.46■□□□□ 0.71
SCAMP4-211ENST00000588907 FOXP1Q9H334 677 aaPredicted RBP19.46■□□□□ 0.71
SCAMP4-211ENST00000588907 RIPK3Q9Y572 518 aa19.46■□□□□ 0.71
SCAMP4-211ENST00000588907 TRPA1O75762 1119 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 FCER1AP12319 257 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 HSD17B4P51659 736 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 NUCB2P80303 420 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 GNL2Q13823 731 aaKnown RBP19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 KCTD2Q14681 263 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 Q3C1V9 767 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 BLIDQ8IZY5 108 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 DNAJC5GQ8N7S2 189 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 EHMT1Q9H9B1 1298 aa19.45■□□□□ 0.7
SCAMP4-211ENST00000588907 VPS37CA5D8V6 355 aaPredicted RBP19.44■□□□□ 0.7
SCAMP4-211ENST00000588907 NFIBO00712 420 aa19.44■□□□□ 0.7
SCAMP4-211ENST00000588907 KIF22Q14807 665 aa19.44■□□□□ 0.7
SCAMP4-211ENST00000588907 MUM1L1Q5H9M0 696 aa19.44■□□□□ 0.7
SCAMP4-211ENST00000588907 RNF207Q6ZRF8 634 aa19.44■□□□□ 0.7
SCAMP4-211ENST00000588907 ANKRD35Q8N283 1001 aa19.44■□□□□ 0.7
SCAMP4-211ENST00000588907 KCNJ14Q9UNX9 436 aa19.44■□□□□ 0.7
SCAMP4-211ENST00000588907 SPDYE3A6NKU9 549 aa19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 OPLAHO14841 1288 aa19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 CFBP00751 764 aa19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 SP3Q02447 781 aa19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 ARHGEF6Q15052 776 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms