RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 ACAD9Q9H845 621 aa16.78■□□□□ 0.28
NPLOC4-218ENST00000574964 RIPK3Q9Y572 518 aa16.78■□□□□ 0.28
NPLOC4-218ENST00000574964 PCDHA1Q9Y5I3 950 aa16.78■□□□□ 0.28
NPLOC4-218ENST00000574964 RBBP6Q7Z6E9 1792 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 PPFIA3O75145 1194 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 GNRH1P01148 92 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 FCER1AP12319 257 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 TAL1P17542 331 aaPredicted RBP16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 KCTD2Q14681 263 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 ANKRD35Q8N283 1001 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 DDX11Q96FC9 970 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 TRIM47Q96LD4 638 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 MMP19Q99542 508 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 RNF26Q9BY78 433 aaPredicted RBP16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 MRPL11Q9Y3B7 192 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
NPLOC4-218ENST00000574964 STRNO43815 780 aa16.76■□□□□ 0.27
NPLOC4-218ENST00000574964 FUT2Q10981 343 aa16.76■□□□□ 0.27
NPLOC4-218ENST00000574964 NTRK3Q16288 839 aa16.76■□□□□ 0.27
NPLOC4-218ENST00000574964 NSMFQ6X4W1 530 aa16.76■□□□□ 0.27
NPLOC4-218ENST00000574964 HEATR3Q7Z4Q2 680 aa16.76■□□□□ 0.27
NPLOC4-218ENST00000574964 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
NPLOC4-218ENST00000574964 SLC15A5A6NIM6 579 aa16.75■□□□□ 0.27
NPLOC4-218ENST00000574964 CD2BP2O95400 341 aaKnown RBP16.75■□□□□ 0.27
NPLOC4-218ENST00000574964 PTPREP23469 700 aa16.75■□□□□ 0.27
NPLOC4-218ENST00000574964 CTGFP29279 349 aa16.75■□□□□ 0.27
NPLOC4-218ENST00000574964 MUM1L1Q5H9M0 696 aa16.75■□□□□ 0.27
NPLOC4-218ENST00000574964 DPP9Q86TI2 863 aa16.75■□□□□ 0.27
NPLOC4-218ENST00000574964 TMX3Q96JJ7 454 aa16.75■□□□□ 0.27
NPLOC4-218ENST00000574964 PRDM10Q9NQV6 1147 aa16.75■□□□□ 0.27
NPLOC4-218ENST00000574964 PPP1R11O60927 126 aaPredicted RBP16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 DEXIO95424 95 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 SCG2P13521 617 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 PRMT2P55345 433 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 CTU1Q7Z7A3 348 aaKnown RBP16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 MCF2L2Q86YR7 1114 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 SOCS4Q8WXH5 440 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 GPKOWQ92917 476 aaPredicted RBP eCLIP16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 SLC5A4Q9NY91 659 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 SRRDQ9UH36 339 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 MCM3APO60318 1980 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 PCNTO95613 3336 aa16.74■□□□□ 0.27
NPLOC4-218ENST00000574964 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 NFIBO00712 420 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 CYP2B6P20813 491 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 ADORA2AP29274 412 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 RGS2P41220 211 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 NAPAP54920 295 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 MAP2K5Q13163 448 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 PFKFB3Q16875 520 aaPredicted RBP16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 RNF207Q6ZRF8 634 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 ABRAQ8N0Z2 381 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 ZNF713Q8N859 430 aaPredicted RBP16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 RAET1EQ8TD07 263 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 WASF1Q92558 559 aa16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 LLPHQ9BRT6 129 aaKnown RBP16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 ORC3Q9UBD5 711 aaPredicted RBP16.73■□□□□ 0.27
NPLOC4-218ENST00000574964 PFASO15067 1338 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 CFBP00751 764 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 FLT3LGP49771 235 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 CAP1Q01518 475 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 PRKCZQ05513 592 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 GRB14Q14449 540 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 WWC2Q6AWC2 1192 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 CLEC4DQ8WXI8 215 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 CUL5Q93034 780 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 SNX21Q969T3 373 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 A1CFQ9NQ94 594 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 GABRQQ9UN88 632 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 ZNF236Q9UL36 1845 aa16.72■□□□□ 0.27
NPLOC4-218ENST00000574964 STK36Q9NRP7 1315 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 DTNBO60941 627 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 PGK2P07205 417 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 XBP1P17861 261 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 CALML3P27482 149 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 BAATQ14032 418 aaPredicted RBP16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 MORN1Q5T089 497 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 FAM184AQ8NB25 1140 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 CCDC148Q8NFR7 591 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 BARHL2Q9NY43 387 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 GJD2Q9UKL4 321 aa16.71■□□□□ 0.27
NPLOC4-218ENST00000574964 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
NPLOC4-218ENST00000574964 JAK2O60674 1132 aa16.7■□□□□ 0.26
NPLOC4-218ENST00000574964 POLR2MP0CAP2 368 aa16.7■□□□□ 0.26
NPLOC4-218ENST00000574964 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
NPLOC4-218ENST00000574964 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
NPLOC4-218ENST00000574964 PKN1Q16512 942 aa16.7■□□□□ 0.26
NPLOC4-218ENST00000574964 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
NPLOC4-218ENST00000574964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.7■□□□□ 0.26
NPLOC4-218ENST00000574964 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms