RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CTU1Q7Z7A3 348 aaKnown RBP25.1■■□□□ 1.61
SNX1-206ENST00000559389 ABRAQ8N0Z2 381 aa25.1■■□□□ 1.61
SNX1-206ENST00000559389 TRERF1Q96PN7 1200 aa25.1■■□□□ 1.61
SNX1-206ENST00000559389 BAZ2BQ9UIF8 2168 aaKnown RBP25.1■■□□□ 1.61
SNX1-206ENST00000559389 SMCHD1A6NHR9 2005 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 SLC15A5A6NIM6 579 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 HOXD10P28358 340 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 PRKCZQ05513 592 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 ST3GAL1Q11201 340 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 MUM1L1Q5H9M0 696 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 CLEC4DQ8WXI8 215 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 MMP19Q99542 508 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 RNF26Q9BY78 433 aaPredicted RBP25.09■■□□□ 1.61
SNX1-206ENST00000559389 GJD2Q9UKL4 321 aa25.09■■□□□ 1.61
SNX1-206ENST00000559389 hCG_1642624A0A1W2PR95 340 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 NFIBO00712 420 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 CPLX1O14810 134 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 STRNO43815 780 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 FCER1AP12319 257 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 PRMT2P55345 433 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 TRAF1Q13077 416 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 CPLX2Q6PUV4 134 aaKnown RBP25.08■■□□□ 1.61
SNX1-206ENST00000559389 NECAB1Q8N987 351 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 USP6NLQ92738 828 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 PHKBQ93100 1093 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 GABRQQ9UN88 632 aa25.08■■□□□ 1.61
SNX1-206ENST00000559389 ADORA2AP29274 412 aa25.07■■□□□ 1.6
SNX1-206ENST00000559389 MCM2P49736 904 aa25.07■■□□□ 1.6
SNX1-206ENST00000559389 KCTD2Q14681 263 aa25.07■■□□□ 1.6
SNX1-206ENST00000559389 ZSCAN31Q96LW9 406 aaPredicted RBP25.07■■□□□ 1.6
SNX1-206ENST00000559389 NUDT12Q9BQG2 462 aa25.07■■□□□ 1.6
SNX1-206ENST00000559389 A1CFQ9NQ94 594 aaKnown RBP25.07■■□□□ 1.6
SNX1-206ENST00000559389 SH2B1Q9NRF2 756 aaPredicted RBP25.07■■□□□ 1.6
SNX1-206ENST00000559389 RBM27Q9P2N5 1060 aaKnown RBP25.07■■□□□ 1.6
SNX1-206ENST00000559389 PCDHA1Q9Y5I3 950 aa25.07■■□□□ 1.6
SNX1-206ENST00000559389 DOCK3Q8IZD9 2030 aa25.07■■□□□ 1.6
SNX1-206ENST00000559389 PRPF3O43395 683 aaKnown RBP25.06■■□□□ 1.6
SNX1-206ENST00000559389 FLT3LGP49771 235 aa25.06■■□□□ 1.6
SNX1-206ENST00000559389 MAP2K5Q13163 448 aa25.06■■□□□ 1.6
SNX1-206ENST00000559389 MRPL11Q9Y3B7 192 aaKnown RBP25.06■■□□□ 1.6
SNX1-206ENST00000559389 V9GY48 417 aaPredicted RBP25.06■■□□□ 1.6
SNX1-206ENST00000559389 LCTP09848 1927 aa25.06■■□□□ 1.6
SNX1-206ENST00000559389 CDKL5O76039 1030 aa25.05■■□□□ 1.6
SNX1-206ENST00000559389 IRF5Q13568 498 aa25.05■■□□□ 1.6
SNX1-206ENST00000559389 APBA2Q99767 749 aa25.05■■□□□ 1.6
SNX1-206ENST00000559389 SLC26A6Q9BXS9 759 aa25.05■■□□□ 1.6
SNX1-206ENST00000559389 PFASO15067 1338 aa25.05■■□□□ 1.6
SNX1-206ENST00000559389 STK36Q9NRP7 1315 aa25.05■■□□□ 1.6
SNX1-206ENST00000559389 DNAJC25-GNG10A0A024R161 153 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 hCG_1984214I3L0E3 225 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 OPLAHO14841 1288 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 CTDNEP1O95476 244 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 HOXC6P09630 235 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 RGS2P41220 211 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 PKN1Q16512 942 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 PFKFB3Q16875 520 aaPredicted RBP25.04■■□□□ 1.6
SNX1-206ENST00000559389 WWC2Q6AWC2 1192 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 TRIM22Q8IYM9 498 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 ANKRD35Q8N283 1001 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 ZNF713Q8N859 430 aaPredicted RBP25.04■■□□□ 1.6
SNX1-206ENST00000559389 GPKOWQ92917 476 aaPredicted RBP eCLIP25.04■■□□□ 1.6
SNX1-206ENST00000559389 PTPN22Q9Y2R2 807 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 PLXNA1Q9UIW2 1896 aa25.04■■□□□ 1.6
SNX1-206ENST00000559389 PPFIA3O75145 1194 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 SCG2P13521 617 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 GHRHRQ02643 423 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 PKN2Q16513 984 aaKnown RBP25.03■■□□□ 1.6
SNX1-206ENST00000559389 NSMFQ6X4W1 530 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 SLC30A10Q6XR72 485 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 HEATR3Q7Z4Q2 680 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 MAF1Q9H063 256 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 CYP39A1Q9NYL5 469 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 PTCH2Q9Y6C5 1203 aa25.03■■□□□ 1.6
SNX1-206ENST00000559389 COBLO75128 1261 aa25.02■■□□□ 1.6
SNX1-206ENST00000559389 XRCC5P13010 732 aaKnown RBP25.02■■□□□ 1.6
SNX1-206ENST00000559389 AKAP17AQ02040 695 aaKnown RBP25.02■■□□□ 1.6
SNX1-206ENST00000559389 SSRP1Q08945 709 aaKnown RBP25.02■■□□□ 1.6
SNX1-206ENST00000559389 PPP1R18Q6NYC8 613 aa25.02■■□□□ 1.6
SNX1-206ENST00000559389 CCDC83Q8IWF9 413 aa25.02■■□□□ 1.6
SNX1-206ENST00000559389 RGS22Q8NE09 1264 aa25.02■■□□□ 1.6
SNX1-206ENST00000559389 NSUN7Q8NE18 718 aaKnown RBP25.02■■□□□ 1.6
SNX1-206ENST00000559389 DDX11Q96FC9 970 aa25.02■■□□□ 1.6
SNX1-206ENST00000559389 ZNFX1Q9P2E3 1918 aaKnown RBP25.02■■□□□ 1.6
SNX1-206ENST00000559389 STXBP3O00186 592 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 PGK2P07205 417 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 CYP2B6P20813 491 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 TYW1BQ6NUM6 668 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 FBXO46Q6PJ61 603 aaPredicted RBP25.01■■□□□ 1.59
SNX1-206ENST00000559389 MCF2L2Q86YR7 1114 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 NPLOC4Q8TAT6 608 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 RAET1EQ8TD07 263 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 TMX3Q96JJ7 454 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 BARHL2Q9NY43 387 aa25.01■■□□□ 1.59
SNX1-206ENST00000559389 PTPDC1A2A3K4 754 aa25■■□□□ 1.59
SNX1-206ENST00000559389 DEXIO95424 95 aa25■■□□□ 1.59
SNX1-206ENST00000559389 ZNF792Q3KQV3 632 aa25■■□□□ 1.59
SNX1-206ENST00000559389 RNF207Q6ZRF8 634 aa25■■□□□ 1.59
SNX1-206ENST00000559389 DPP9Q86TI2 863 aa25■■□□□ 1.59
SNX1-206ENST00000559389 FAM133AQ8N9E0 248 aa25■■□□□ 1.59
SNX1-206ENST00000559389 HSD17B4P51659 736 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms