RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ACAD9Q9H845 621 aa24.81■■□□□ 1.56
NEK3-202ENST00000550841 NCOA5Q9HCD5 579 aaKnown RBP24.81■■□□□ 1.56
NEK3-202ENST00000550841 MRPL11Q9Y3B7 192 aaKnown RBP24.81■■□□□ 1.56
NEK3-202ENST00000550841 RIPK3Q9Y572 518 aa24.81■■□□□ 1.56
NEK3-202ENST00000550841 SLC15A5A6NIM6 579 aa24.8■■□□□ 1.56
NEK3-202ENST00000550841 PRPF3O43395 683 aaKnown RBP24.8■■□□□ 1.56
NEK3-202ENST00000550841 PTPREP23469 700 aa24.8■■□□□ 1.56
NEK3-202ENST00000550841 FBXO46Q6PJ61 603 aaPredicted RBP24.8■■□□□ 1.56
NEK3-202ENST00000550841 PIBF1Q8WXW3 757 aa24.8■■□□□ 1.56
NEK3-202ENST00000550841 NUDT12Q9BQG2 462 aa24.8■■□□□ 1.56
NEK3-202ENST00000550841 RNF146Q9NTX7 359 aa24.8■■□□□ 1.56
NEK3-202ENST00000550841 PCDHA1Q9Y5I3 950 aa24.8■■□□□ 1.56
NEK3-202ENST00000550841 ECM2O94769 699 aaPredicted RBP24.79■■□□□ 1.56
NEK3-202ENST00000550841 SSRP1Q08945 709 aaKnown RBP24.79■■□□□ 1.56
NEK3-202ENST00000550841 KCTD2Q14681 263 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 NTRK3Q16288 839 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 USH1GQ495M9 461 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.79■■□□□ 1.56
NEK3-202ENST00000550841 SOCS4Q8WXH5 440 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 GTF3C6Q969F1 213 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 MMP19Q99542 508 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 RNF26Q9BY78 433 aaPredicted RBP24.79■■□□□ 1.56
NEK3-202ENST00000550841 HOMER2Q9NSB8 354 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 TRIM17Q9Y577 477 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 CNTNAP5Q8WYK1 1306 aa24.79■■□□□ 1.56
NEK3-202ENST00000550841 MYH6P13533 1939 aa24.78■■□□□ 1.56
NEK3-202ENST00000550841 CTGFP29279 349 aa24.78■■□□□ 1.56
NEK3-202ENST00000550841 MCF2L2Q86YR7 1114 aa24.78■■□□□ 1.56
NEK3-202ENST00000550841 SLC5A4Q9NY91 659 aa24.78■■□□□ 1.56
NEK3-202ENST00000550841 SRRDQ9UH36 339 aa24.78■■□□□ 1.56
NEK3-202ENST00000550841 MGAMO43451 1857 aa24.78■■□□□ 1.56
NEK3-202ENST00000550841 hCG_1984214I3L0E3 225 aa24.77■■□□□ 1.56
NEK3-202ENST00000550841 OTOP1Q7RTM1 612 aa24.77■■□□□ 1.56
NEK3-202ENST00000550841 ANKRD35Q8N283 1001 aa24.77■■□□□ 1.56
NEK3-202ENST00000550841 SAMD3Q8N6K7 520 aa24.77■■□□□ 1.56
NEK3-202ENST00000550841 ZNF713Q8N859 430 aaPredicted RBP24.77■■□□□ 1.56
NEK3-202ENST00000550841 NECAB1Q8N987 351 aa24.77■■□□□ 1.56
NEK3-202ENST00000550841 RGS22Q8NE09 1264 aa24.77■■□□□ 1.56
NEK3-202ENST00000550841 DDX11Q96FC9 970 aa24.77■■□□□ 1.56
NEK3-202ENST00000550841 SLC26A6Q9BXS9 759 aa24.77■■□□□ 1.56
NEK3-202ENST00000550841 SLC34A2O95436 690 aa24.76■■□□□ 1.55
NEK3-202ENST00000550841 LARGE1O95461 756 aa24.76■■□□□ 1.55
NEK3-202ENST00000550841 GRB14Q14449 540 aa24.76■■□□□ 1.55
NEK3-202ENST00000550841 MORN1Q5T089 497 aa24.76■■□□□ 1.55
NEK3-202ENST00000550841 GJD2Q9UKL4 321 aa24.76■■□□□ 1.55
NEK3-202ENST00000550841 PFASO15067 1338 aa24.76■■□□□ 1.55
NEK3-202ENST00000550841 PPP1R11O60927 126 aaPredicted RBP24.75■■□□□ 1.55
NEK3-202ENST00000550841 RGS2P41220 211 aa24.75■■□□□ 1.55
NEK3-202ENST00000550841 MAP2K5Q13163 448 aa24.75■■□□□ 1.55
NEK3-202ENST00000550841 PFKFB3Q16875 520 aaPredicted RBP24.75■■□□□ 1.55
NEK3-202ENST00000550841 DPP9Q86TI2 863 aa24.75■■□□□ 1.55
NEK3-202ENST00000550841 PHKBQ93100 1093 aa24.75■■□□□ 1.55
NEK3-202ENST00000550841 DOCK3Q8IZD9 2030 aa24.74■■□□□ 1.55
NEK3-202ENST00000550841 hCG_1642624A0A1W2PR95 340 aa24.74■■□□□ 1.55
NEK3-202ENST00000550841 SCG2P13521 617 aa24.74■■□□□ 1.55
NEK3-202ENST00000550841 ADORA2AP29274 412 aa24.74■■□□□ 1.55
NEK3-202ENST00000550841 MUM1L1Q5H9M0 696 aa24.74■■□□□ 1.55
NEK3-202ENST00000550841 CLEC4DQ8WXI8 215 aa24.74■■□□□ 1.55
NEK3-202ENST00000550841 LLPHQ9BRT6 129 aaKnown RBP24.74■■□□□ 1.55
NEK3-202ENST00000550841 MAP3K20Q9NYL2 800 aaKnown RBP24.74■■□□□ 1.55
NEK3-202ENST00000550841 DEXIO95424 95 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 FLT3LGP49771 235 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 CAP1Q01518 475 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 IRF5Q13568 498 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 NSMFQ6X4W1 530 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 HEATR3Q7Z4Q2 680 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 TRMT44Q8IYL2 757 aaKnown RBP24.73■■□□□ 1.55
NEK3-202ENST00000550841 RAET1EQ8TD07 263 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 WASF1Q92558 559 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 TMX3Q96JJ7 454 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 SMCHD1A6NHR9 2005 aa24.73■■□□□ 1.55
NEK3-202ENST00000550841 STK36Q9NRP7 1315 aa24.72■■□□□ 1.55
NEK3-202ENST00000550841 XRCC5P13010 732 aaKnown RBP24.72■■□□□ 1.55
NEK3-202ENST00000550841 PRKCZQ05513 592 aa24.72■■□□□ 1.55
NEK3-202ENST00000550841 RNF207Q6ZRF8 634 aa24.72■■□□□ 1.55
NEK3-202ENST00000550841 CCDC83Q8IWF9 413 aa24.72■■□□□ 1.55
NEK3-202ENST00000550841 CCDC12Q8WUD4 166 aaPredicted RBP24.72■■□□□ 1.55
NEK3-202ENST00000550841 USP6NLQ92738 828 aa24.72■■□□□ 1.55
NEK3-202ENST00000550841 SNX21Q969T3 373 aa24.72■■□□□ 1.55
NEK3-202ENST00000550841 A1CFQ9NQ94 594 aaKnown RBP24.72■■□□□ 1.55
NEK3-202ENST00000550841 GABRQQ9UN88 632 aa24.72■■□□□ 1.55
NEK3-202ENST00000550841 DIS3Q9Y2L1 958 aaKnown RBP24.72■■□□□ 1.55
NEK3-202ENST00000550841 ZNFX1Q9P2E3 1918 aaKnown RBP24.71■■□□□ 1.55
NEK3-202ENST00000550841 PTPDC1A2A3K4 754 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 NFIBO00712 420 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 CD2BP2O95400 341 aaKnown RBP24.71■■□□□ 1.55
NEK3-202ENST00000550841 HOXC6P09630 235 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 PPP1R18Q6NYC8 613 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 TEX2Q8IWB9 1127 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 GLT8D2Q9H1C3 349 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 BARHL2Q9NY43 387 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 CYP39A1Q9NYL5 469 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 PTPN22Q9Y2R2 807 aa24.71■■□□□ 1.55
NEK3-202ENST00000550841 POTEB2H3BUK9 544 aa24.7■■□□□ 1.54
NEK3-202ENST00000550841 CTDNEP1O95476 244 aa24.7■■□□□ 1.54
NEK3-202ENST00000550841 TAL1P17542 331 aaPredicted RBP24.7■■□□□ 1.54
NEK3-202ENST00000550841 CYP2B6P20813 491 aa24.7■■□□□ 1.54
NEK3-202ENST00000550841 BAATQ14032 418 aaPredicted RBP24.7■■□□□ 1.54
NEK3-202ENST00000550841 PKN1Q16512 942 aa24.7■■□□□ 1.54
NEK3-202ENST00000550841 WWC2Q6AWC2 1192 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms