RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 IVNS1ABPQ9Y6Y0 642 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 RBBP6Q7Z6E9 1792 aaKnown RBP16.73■□□□□ 0.27
USP11-212ENST00000497179 HTTP42858 3142 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 SLC15A5A6NIM6 579 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 CPLX1O14810 134 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 CD2BP2O95400 341 aaKnown RBP16.72■□□□□ 0.27
USP11-212ENST00000497179 HOXD10P28358 340 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 PRMT2P55345 433 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 MUM1L1Q5H9M0 696 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 MORN1Q5T089 497 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 CTU1Q7Z7A3 348 aaKnown RBP16.72■□□□□ 0.27
USP11-212ENST00000497179 NECAB1Q8N987 351 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 CLEC4DQ8WXI8 215 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
USP11-212ENST00000497179 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
USP11-212ENST00000497179 RBM27Q9P2N5 1060 aaKnown RBP16.72■□□□□ 0.27
USP11-212ENST00000497179 SRRDQ9UH36 339 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 MYH6P13533 1939 aa16.72■□□□□ 0.27
USP11-212ENST00000497179 hCG_1642624A0A1W2PR95 340 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
USP11-212ENST00000497179 CDKL5O76039 1030 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 FCER1AP12319 257 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 PRKCZQ05513 592 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 ST3GAL1Q11201 340 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 KCTD2Q14681 263 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 USP6NLQ92738 828 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 PHKBQ93100 1093 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 MMP19Q99542 508 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 GJD2Q9UKL4 321 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 MRPL11Q9Y3B7 192 aaKnown RBP16.71■□□□□ 0.27
USP11-212ENST00000497179 PCDHA1Q9Y5I3 950 aa16.71■□□□□ 0.27
USP11-212ENST00000497179 V9GY48 417 aaPredicted RBP16.71■□□□□ 0.27
USP11-212ENST00000497179 BAZ2BQ9UIF8 2168 aaKnown RBP16.7■□□□□ 0.26
USP11-212ENST00000497179 NFIBO00712 420 aa16.7■□□□□ 0.26
USP11-212ENST00000497179 ADORA2AP29274 412 aa16.7■□□□□ 0.26
USP11-212ENST00000497179 PFKFB3Q16875 520 aaPredicted RBP16.7■□□□□ 0.26
USP11-212ENST00000497179 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
USP11-212ENST00000497179 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
USP11-212ENST00000497179 MAF1Q9H063 256 aa16.7■□□□□ 0.26
USP11-212ENST00000497179 A1CFQ9NQ94 594 aaKnown RBP16.7■□□□□ 0.26
USP11-212ENST00000497179 GABRQQ9UN88 632 aa16.7■□□□□ 0.26
USP11-212ENST00000497179 PFASO15067 1338 aa16.7■□□□□ 0.26
USP11-212ENST00000497179 STK36Q9NRP7 1315 aa16.7■□□□□ 0.26
USP11-212ENST00000497179 hCG_1984214I3L0E3 225 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 CTDNEP1O95476 244 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 HOXC6P09630 235 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 FLT3LGP49771 235 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
USP11-212ENST00000497179 MAP2K5Q13163 448 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 IRF5Q13568 498 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 PKN1Q16512 942 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 WWC2Q6AWC2 1192 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 PPP1R18Q6NYC8 613 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 TRIM22Q8IYM9 498 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 ZNF713Q8N859 430 aaPredicted RBP16.69■□□□□ 0.26
USP11-212ENST00000497179 RGS22Q8NE09 1264 aa16.69■□□□□ 0.26
USP11-212ENST00000497179 DNAJC25-GNG10A0A024R161 153 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 OPLAHO14841 1288 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 SCG2P13521 617 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 RGS2P41220 211 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 GHRHRQ02643 423 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 SSRP1Q08945 709 aaKnown RBP16.68■□□□□ 0.26
USP11-212ENST00000497179 HEATR3Q7Z4Q2 680 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 NSUN7Q8NE18 718 aaKnown RBP16.68■□□□□ 0.26
USP11-212ENST00000497179 GPKOWQ92917 476 aaPredicted RBP eCLIP16.68■□□□□ 0.26
USP11-212ENST00000497179 TMX3Q96JJ7 454 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 APBA2Q99767 749 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 PTPN22Q9Y2R2 807 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 SMCHD1A6NHR9 2005 aa16.68■□□□□ 0.26
USP11-212ENST00000497179 STXBP3O00186 592 aa16.67■□□□□ 0.26
USP11-212ENST00000497179 COBLO75128 1261 aa16.67■□□□□ 0.26
USP11-212ENST00000497179 PPFIA3O75145 1194 aa16.67■□□□□ 0.26
USP11-212ENST00000497179 DEXIO95424 95 aa16.67■□□□□ 0.26
USP11-212ENST00000497179 XRCC5P13010 732 aaKnown RBP16.67■□□□□ 0.26
USP11-212ENST00000497179 PKN2Q16513 984 aaKnown RBP16.67■□□□□ 0.26
USP11-212ENST00000497179 NSMFQ6X4W1 530 aa16.67■□□□□ 0.26
USP11-212ENST00000497179 MCF2L2Q86YR7 1114 aa16.67■□□□□ 0.26
USP11-212ENST00000497179 BARHL2Q9NY43 387 aa16.67■□□□□ 0.26
USP11-212ENST00000497179 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 PGK2P07205 417 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 CYP2B6P20813 491 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 BAATQ14032 418 aaPredicted RBP16.66■□□□□ 0.26
USP11-212ENST00000497179 ZNF792Q3KQV3 632 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 TYW1BQ6NUM6 668 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 FBXO46Q6PJ61 603 aaPredicted RBP16.66■□□□□ 0.26
USP11-212ENST00000497179 SLC30A10Q6XR72 485 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 RNF207Q6ZRF8 634 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 DPP9Q86TI2 863 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 SAMD3Q8N6K7 520 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 FAM133AQ8N9E0 248 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 SNX21Q969T3 373 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 LLPHQ9BRT6 129 aaKnown RBP16.66■□□□□ 0.26
USP11-212ENST00000497179 SLC5A4Q9NY91 659 aa16.66■□□□□ 0.26
USP11-212ENST00000497179 DIS3Q9Y2L1 958 aaKnown RBP16.66■□□□□ 0.26
USP11-212ENST00000497179 PTCH2Q9Y6C5 1203 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms