RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 CTDP1Q9Y5B0 961 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-223ENST00000480525 GTF3C3Q9Y5Q9 886 aa5.9□□□□□ -1.46
HDAC6-223ENST00000480525 RPTORQ8N122 1335 aa5.9□□□□□ -1.47
HDAC6-223ENST00000480525 BRCA2P51587 3418 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 PRPF3O43395 683 aaKnown RBP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 ADCY3O60266 1144 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 FOSP01100 380 aaPredicted RBP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 GJB1P08034 283 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 ADORA2AP29274 412 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 PDIA3P30101 505 aaKnown RBP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 METAP2P50579 478 aaKnown RBP eCLIP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 PRKCZQ05513 592 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 AP3B2Q13367 1082 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 NTRK3Q16288 839 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 CDC37Q16543 378 aaPredicted RBP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 RTN1Q16799 776 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 QRICH1Q2TAL8 776 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 SLC9C1Q4G0N8 1177 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 KCNV1Q6PIU1 500 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 FBXO11Q86XK2 927 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 RAET1EQ8TD07 263 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 CLEC4DQ8WXI8 215 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 BRF1Q92994 677 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 MAML3Q96JK9 1138 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 ZSCAN31Q96LW9 406 aaPredicted RBP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 TRERF1Q96PN7 1200 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 MMP19Q99542 508 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 NUP88Q99567 741 aaPredicted RBP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 KIF2CQ99661 725 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 ZKSCAN3Q9BRR0 538 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 PAGR1Q9BTK6 254 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 C22orf23Q9BZE7 217 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 CRISPLD2Q9H0B8 497 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 ABHD16BQ9H3Z7 469 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 A1CFQ9NQ94 594 aaKnown RBP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 RNF146Q9NTX7 359 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 FAM217BQ9NTX9 383 aaPredicted RBP5.89□□□□□ -1.47
HDAC6-223ENST00000480525 CYP39A1Q9NYL5 469 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 CCPG1Q9ULG6 757 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 HPS5Q9UPZ3 1129 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 CNTNAP5Q8WYK1 1306 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 MYH7BA7E2Y1 1941 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 WDR81Q562E7 1941 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 SCN10AQ9Y5Y9 1956 aa5.89□□□□□ -1.47
HDAC6-223ENST00000480525 KLF18A0A0U1RQI7 1052 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 RBM47A0AV96 593 aaKnown RBP5.88□□□□□ -1.47
HDAC6-223ENST00000480525 NKRFO15226 690 aaKnown RBP eCLIP5.88□□□□□ -1.47
HDAC6-223ENST00000480525 MAFGO15525 162 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 ST18O60284 1047 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 PFKFB2O60825 505 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 TGFB3P10600 412 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 CYBAP13498 195 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 CST5P28325 142 aaPredicted RBP5.88□□□□□ -1.47
HDAC6-223ENST00000480525 GJA8P48165 433 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 FGD1P98174 961 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 CAP1Q01518 475 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 IKQ13123 557 aaPredicted RBP5.88□□□□□ -1.47
HDAC6-223ENST00000480525 PFKFB3Q16875 520 aaPredicted RBP5.88□□□□□ -1.47
HDAC6-223ENST00000480525 COL13A1Q5TAT6 717 aaPredicted RBP5.88□□□□□ -1.47
HDAC6-223ENST00000480525 C1orf53Q5VUE5 145 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 MFSD14CQ5VZR4 134 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 NFXL1Q6ZNB6 911 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 FAM43BQ6ZT52 329 aaPredicted RBP5.88□□□□□ -1.47
HDAC6-223ENST00000480525 Q6ZUG5 572 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 NCAPG2Q86XI2 1143 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 STK11IPQ8N1F8 1099 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 STAG2Q8N3U4 1231 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 SRBD1Q8N5C6 995 aaKnown RBP5.88□□□□□ -1.47
HDAC6-223ENST00000480525 DAGLBQ8NCG7 672 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 CCDC148Q8NFR7 591 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 BICD2Q8TD16 824 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 TRIB2Q92519 343 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 WASF1Q92558 559 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 TINF2Q9BSI4 451 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 ARHGAP39Q9C0H5 1083 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 ZMYND12Q9H0C1 365 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 VTA1Q9NP79 307 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 PDRG1Q9NUG6 133 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 BARHL2Q9NY43 387 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 BRPF3Q9ULD4 1205 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 RIPK3Q9Y572 518 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 PCDHA1Q9Y5I3 950 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 PTCH2Q9Y6C5 1203 aa5.88□□□□□ -1.47
HDAC6-223ENST00000480525 GOLGA8AA7E2F4 631 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 GOLGA8BA8MQT2 603 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 OPLAHO14841 1288 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 SEPT4O43236 478 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 DEXIO95424 95 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 SCG2P13521 617 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 GNA11P29992 359 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 CLK2P49760 499 aaKnown RBP5.87□□□□□ -1.47
HDAC6-223ENST00000480525 RPS6P62753 249 aaKnown RBP5.87□□□□□ -1.47
HDAC6-223ENST00000480525 HMGN5P82970 282 aaKnown RBP5.87□□□□□ -1.47
HDAC6-223ENST00000480525 PLS1Q14651 629 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 SLC35G1Q2M3R5 365 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 TTBK2Q6IQ55 1244 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 MOXD1Q6UVY6 613 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 RNF207Q6ZRF8 634 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 UBE2Q1Q7Z7E8 422 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 DPP9Q86TI2 863 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms