RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 SNRNP48Q6IEG0 339 aaKnown RBP17.46■□□□□ 0.39
MCF2L-224ENST00000475524 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
MCF2L-224ENST00000475524 HEATR3Q7Z4Q2 680 aa17.46■□□□□ 0.39
MCF2L-224ENST00000475524 PAGR1Q9BTK6 254 aa17.46■□□□□ 0.39
MCF2L-224ENST00000475524 ZMYND12Q9H0C1 365 aa17.46■□□□□ 0.39
MCF2L-224ENST00000475524 TXNRD2Q9NNW7 524 aa17.46■□□□□ 0.39
MCF2L-224ENST00000475524 GNA11P29992 359 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 NAPAP54920 295 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 TRIM29Q14134 588 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 MCF2L2Q86YR7 1114 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 CPXCR1Q8N123 301 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 DAGLBQ8NCG7 672 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 C8orf76Q96K31 380 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 AGBL1Q96MI9 1066 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 IPO9Q96P70 1041 aaKnown RBP17.45■□□□□ 0.38
MCF2L-224ENST00000475524 MOV10L1Q9BXT6 1211 aaKnown RBP17.45■□□□□ 0.38
MCF2L-224ENST00000475524 RNF186Q9NXI6 227 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 MGAMO43451 1857 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 SMCHD1A6NHR9 2005 aa17.45■□□□□ 0.38
MCF2L-224ENST00000475524 hCG_1642624A0A1W2PR95 340 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 MAPK4P31152 587 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 SNAP25P60880 206 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 BICD2Q8TD16 824 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 PIBF1Q8WXW3 757 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.38
MCF2L-224ENST00000475524 PHF20Q9BVI0 1012 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 ACAD9Q9H845 621 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 RNF146Q9NTX7 359 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 PLXNB2O15031 1838 aa17.44■□□□□ 0.38
MCF2L-224ENST00000475524 PIK3CDO00329 1044 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 ALAS1P13196 640 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 MRPL12P52815 198 aaKnown RBP17.43■□□□□ 0.38
MCF2L-224ENST00000475524 PLS1Q14651 629 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 USH1GQ495M9 461 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 ABRAQ8N0Z2 381 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 COA7Q96BR5 231 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 BEGAINQ9BUH8 593 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 C6orf50Q9HD87 102 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 RIC8AQ9NPQ8 531 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 PFASO15067 1338 aa17.43■□□□□ 0.38
MCF2L-224ENST00000475524 STRNO43815 780 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 PPFIA3O75145 1194 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 Q3C1V9 767 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 LARP1BQ659C4 914 aaKnown RBP17.42■□□□□ 0.38
MCF2L-224ENST00000475524 TYW1BQ6NUM6 668 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 JMYQ8N9B5 988 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 CLEC4DQ8WXI8 215 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 CUL5Q93034 780 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 AIFM3Q96NN9 605 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 BRMS1Q9HCU9 246 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 CPA4Q9UI42 421 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 RIPK3Q9Y572 518 aa17.42■□□□□ 0.38
MCF2L-224ENST00000475524 SMCO2A6NFE2 343 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 OPLAHO14841 1288 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 MMP1P03956 469 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 ERCC3P19447 782 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 HSD17B4P51659 736 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 ADCY7P51828 1080 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 NLRP5P59047 1200 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
MCF2L-224ENST00000475524 KRT40Q6A162 431 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 PSTPIP2Q9H939 334 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 WBP1LQ9NX94 342 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
MCF2L-224ENST00000475524 TRPA1O75762 1119 aa17.4■□□□□ 0.38
MCF2L-224ENST00000475524 AP3B2Q13367 1082 aa17.4■□□□□ 0.38
MCF2L-224ENST00000475524 NPY5RQ15761 445 aa17.4■□□□□ 0.38
MCF2L-224ENST00000475524 NCAPG2Q86XI2 1143 aa17.4■□□□□ 0.38
MCF2L-224ENST00000475524 CCAR1Q8IX12 1150 aaKnown RBP17.4■□□□□ 0.38
MCF2L-224ENST00000475524 SHISA4Q96DD7 197 aa17.4■□□□□ 0.38
MCF2L-224ENST00000475524 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-224ENST00000475524 ZNFX1Q9P2E3 1918 aaKnown RBP17.4■□□□□ 0.38
MCF2L-224ENST00000475524 LOC102724159A0A0B4J2E5 919 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 H3BQV1 296 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 GCOM1H8Y6P7 765 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-224ENST00000475524 NFIBO00712 420 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 FOSP01100 380 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-224ENST00000475524 POLR2MP0CAP2 368 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 SYT1P21579 422 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 DDIT3P35638 169 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
MCF2L-224ENST00000475524 PWP2Q15269 919 aaKnown RBP17.39■□□□□ 0.37
MCF2L-224ENST00000475524 MUM1L1Q5H9M0 696 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 IFFO2Q5TF58 517 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 BLIDQ8IZY5 108 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 PORCNQ9H237 461 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-224ENST00000475524 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 IVNS1ABPQ9Y6Y0 642 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 CASP8AP2Q9UKL3 1982 aa17.39■□□□□ 0.37
MCF2L-224ENST00000475524 PLXNA1Q9UIW2 1896 aa17.38■□□□□ 0.37
MCF2L-224ENST00000475524 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
MCF2L-224ENST00000475524 M0R2N6 131 aa17.38■□□□□ 0.37
MCF2L-224ENST00000475524 GPR25O00155 361 aa17.38■□□□□ 0.37
MCF2L-224ENST00000475524 MEIS2O14770 477 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms