RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PCDHB10Q9UN67 800 aa6.16□□□□□ -1.42
LINC00393-202ENST00000452852 SLC12A7Q9Y666 1083 aa6.16□□□□□ -1.42
LINC00393-202ENST00000452852 EPRSP07814 1512 aaKnown RBP6.15□□□□□ -1.42
LINC00393-202ENST00000452852 CFAP43Q8NDM7 1665 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 TMEM82A0PJX8 343 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.15□□□□□ -1.42
LINC00393-202ENST00000452852 FKTNO75072 461 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 GLI1P08151 1106 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 CTSKP43235 329 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 BBS9Q3SYG4 887 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 ZPBP2Q6X784 338 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 WAPLQ7Z5K2 1190 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 OXR1Q8N573 874 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 C19orf47Q8N9M1 422 aaKnown RBP6.15□□□□□ -1.42
LINC00393-202ENST00000452852 PDZD8Q8NEN9 1154 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 LINC01599Q8WXQ3 324 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 LIN37Q96GY3 246 aaPredicted RBP6.15□□□□□ -1.42
LINC00393-202ENST00000452852 SRPK1Q96SB4 655 aaKnown RBP6.15□□□□□ -1.42
LINC00393-202ENST00000452852 G6PC3Q9BUM1 346 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 C19orf44Q9H6X5 657 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 PRR13Q9NZ81 148 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.15□□□□□ -1.42
LINC00393-202ENST00000452852 ZMYM5Q9UJ78 669 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 STRIP2Q9ULQ0 834 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 ZNF451Q9Y4E5 1061 aa6.15□□□□□ -1.42
LINC00393-202ENST00000452852 WDR7Q9Y4E6 1490 aa6.15□□□□□ -1.43
LINC00393-202ENST00000452852 KLF4O43474 513 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 CD247P20963 164 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 CASP7P55210 303 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 DUSP4Q13115 394 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 GNPTABQ3T906 1256 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 TIGD5Q53EQ6 642 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 NBPF6Q5VWK0 638 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 CRTC3Q6UUV7 619 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 BRF1Q92994 677 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 GPATCH3Q96I76 525 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 NBPF4Q96M43 638 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 DSCC1Q9BVC3 393 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 TRIM55Q9BYV6 548 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 PHAXQ9H814 394 aaKnown RBP6.14□□□□□ -1.43
LINC00393-202ENST00000452852 GP6Q9HCN6 339 aa6.14□□□□□ -1.43
LINC00393-202ENST00000452852 FITM1A5D6W6 292 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 FAM221BA6H8Z2 402 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 CCDC85CA6NKD9 419 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 BMP8BP34820 402 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 ZNF445P59923 1031 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 NOL9Q5SY16 702 aaKnown RBP6.13□□□□□ -1.43
LINC00393-202ENST00000452852 MKL1Q969V6 931 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 SIRPGQ9P1W8 387 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 PRXQ9BXM0 1461 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 ABCA8O94911 1581 aa6.13□□□□□ -1.43
LINC00393-202ENST00000452852 LRRC10BA6NIK2 292 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 U2SURPO15042 1029 aaKnown RBP6.12□□□□□ -1.43
LINC00393-202ENST00000452852 CBFA2T2O43439 604 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 ZNF205O95201 554 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 GSNP06396 782 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 VAV1P15498 845 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 SLC7A5Q01650 507 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 CHRNEQ04844 493 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 RAB33AQ14088 237 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 NR0B2Q15466 257 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 ZNF124Q15973 351 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 MLANAQ16655 118 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 ZNF648Q5T619 568 aaPredicted RBP6.12□□□□□ -1.43
LINC00393-202ENST00000452852 MPZL3Q6UWV2 235 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 SPPL2CQ8IUH8 684 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 ANKS4BQ8N8V4 417 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 MAP6Q96JE9 813 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 RNPC3Q96LT9 517 aaKnown RBP6.12□□□□□ -1.43
LINC00393-202ENST00000452852 HAUS7Q99871 368 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 RNF32Q9H0A6 362 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 FAM53CQ9NYF3 392 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 FHOD1Q9Y613 1164 aa6.12□□□□□ -1.43
LINC00393-202ENST00000452852 H0Y8X5 98 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 PRRG2O14669 202 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 SMAD7O15105 426 aaKnown RBP6.11□□□□□ -1.43
LINC00393-202ENST00000452852 USP2O75604 605 aaPredicted RBP6.11□□□□□ -1.43
LINC00393-202ENST00000452852 ITGA4P13612 1032 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 HSD3B2P26439 372 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 PRR23BQ6ZRT6 265 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 LILRA2Q8N149 483 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 FIBCD1Q8N539 461 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 KLHL6Q8WZ60 621 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 HHIPL1Q96JK4 782 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 DEPDC7Q96QD5 511 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 CDADC1Q9BWV3 514 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 SNTG2Q9NY99 539 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 PRKAG3Q9UGI9 489 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 GPR160Q9UJ42 338 aa6.11□□□□□ -1.43
LINC00393-202ENST00000452852 R3HCC1Q9Y3T6 440 aaKnown RBP6.11□□□□□ -1.43
LINC00393-202ENST00000452852 RAPGEF6Q8TEU7 1601 aa6.1□□□□□ -1.43
LINC00393-202ENST00000452852 ADGRL1O94910 1474 aa6.1□□□□□ -1.43
LINC00393-202ENST00000452852 CD109Q6YHK3 1445 aa6.1□□□□□ -1.43
LINC00393-202ENST00000452852 NOTOA8MTQ0 251 aa6.1□□□□□ -1.43
LINC00393-202ENST00000452852 PSPNO60542 156 aa6.1□□□□□ -1.43
LINC00393-202ENST00000452852 CLSTN1O94985 981 aa6.1□□□□□ -1.43
LINC00393-202ENST00000452852 PTPROQ16827 1216 aa6.1□□□□□ -1.43
LINC00393-202ENST00000452852 RTP2Q5QGT7 225 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms