RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ANKLE2Q86XL3 938 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 SMYD4Q8IYR2 804 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 MFSD2AQ8NA29 543 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 SMC1BQ8NDV3 1235 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 SYTL5Q8TDW5 730 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 CCDC140Q96MF4 163 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 VTA1Q9NP79 307 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 PRDM6Q9NQX0 595 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 CYP26B1Q9NR63 512 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 ADAMTS8Q9UP79 889 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 SPEF1Q9Y4P9 236 aa5.27□□□□□ -1.57
CDC42BPA-207ENST00000441725 F2P00734 622 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 IARSP41252 1262 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 SOX4Q06945 474 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 SART3Q15020 963 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 KIAA1211Q6ZU35 1233 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 CDH24Q86UP0 819 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 DGKHQ86XP1 1220 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 KREMEN2Q8NCW0 462 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 IL17RAQ96F46 866 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 MIPEPQ99797 713 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 PRDM14Q9GZV8 571 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 GSX1Q9H4S2 264 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 SUGCTQ9HAC7 445 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 CYP4F12Q9HCS2 524 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 LUC7LQ9NQ29 371 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 ENAMQ9NRM1 1142 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 GFOD1Q9NXC2 390 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 DIS3Q9Y2L1 958 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 ACTL7BQ9Y614 415 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 MEGF11A6BM72 1044 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 VSTM5A8MXK1 200 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 CBX4O00257 560 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 AQP7O14520 342 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 FKBP9O95302 570 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 CPP00450 1065 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 BCRP11274 1271 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 ASPAP45381 313 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 SCRN1Q12765 414 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 DPY19L1Q2PZI1 675 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 C4orf46Q504U0 113 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 LETMD1Q6P1Q0 360 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 FKBP9P1Q75LS8 142 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 MTDHQ86UE4 582 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 GALNT6Q8NCL4 622 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 DCAF4Q8WV16 495 aa5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 GPR101Q96P66 508 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-207ENST00000441725 TIAF1O95411 115 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 MYBL2P10244 700 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 ERVK-21P61565 698 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 AMPD2Q01433 879 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 DDX53Q86TM3 631 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 KIF18BQ86Y91 864 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 IGSF22Q8N9C0 903 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 SMG8Q8ND04 991 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 EDARADDQ8WWZ3 215 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 TIFAQ96CG3 184 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 FBXL18Q96ME1 805 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 MCMBPQ9BTE3 642 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 MENTQ9BUN1 341 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 RNF208Q9H0X6 261 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 EMC7Q9NPA0 242 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 OBP2AQ9NY56 170 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 MINPP1Q9UNW1 487 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 COQ6Q9Y2Z9 468 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 ABCC9O60706 1549 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 TRAF5O00463 557 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 LRRN2O75325 713 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 SLITRK5O94991 958 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 SAFB2Q14151 953 aaKnown RBP eCLIP5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 ATP13A4Q4VNC1 1196 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 ACAD11Q709F0 780 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 C12orf50Q8NA57 414 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 ASPNQ9BXN1 380 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 ZNF700Q9H0M5 742 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 SPTLC3Q9NUV7 552 aa5.25□□□□□ -1.57
CDC42BPA-207ENST00000441725 WDR64B1ANS9 1081 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 H0Y8X5 98 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 K7ESF4 209 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 OIP5O43482 229 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 MT-CO1P00395 513 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 CT47B1P0C2W7 299 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 PAX3P23760 479 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 INAVAQ3KP66 663 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 TMC3Q7Z5M5 1100 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 PPIL6Q8IXY8 311 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 C2CD4AQ8NCU7 369 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 RNF141Q8WVD5 230 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 FUBP3Q96I24 572 aaKnown RBP eCLIP5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 BTBD6Q96KE9 485 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 ARPC5LQ9BPX5 153 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 DSCC1Q9BVC3 393 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 PHF20Q9BVI0 1012 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 GPRC5CQ9NQ84 441 aa5.24□□□□□ -1.57
CDC42BPA-207ENST00000441725 SHISA8B8ZZ34 492 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 FZD9O00144 591 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 ARVCFO00192 962 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 ARNTLO00327 626 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms