RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TKFCQ3LXA3 575 aa35.37■■■■□ 3.25
CSNK1E-206ENST00000413574 CHST13Q8NET6 341 aa35.37■■■■□ 3.25
CSNK1E-206ENST00000413574 CLEC4DQ8WXI8 215 aa35.37■■■■□ 3.25
CSNK1E-206ENST00000413574 GPKOWQ92917 476 aaPredicted RBP eCLIP35.37■■■■□ 3.25
CSNK1E-206ENST00000413574 TMX3Q96JJ7 454 aa35.37■■■■□ 3.25
CSNK1E-206ENST00000413574 NFIBO00712 420 aa35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 PRPF3O43395 683 aaKnown RBP35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 MCM2P49736 904 aa35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 CPLX2Q6PUV4 134 aaKnown RBP35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 ACAD9Q9H845 621 aa35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 SH2B1Q9NRF2 756 aaPredicted RBP35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 GABRQQ9UN88 632 aa35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 TRIM17Q9Y577 477 aa35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 IVNS1ABPQ9Y6Y0 642 aa35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 CENPFP49454 3210 aa35.36■■■■□ 3.25
CSNK1E-206ENST00000413574 PTPREP23469 700 aa35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 OTOP1Q7RTM1 612 aa35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 RNF26Q9BY78 433 aaPredicted RBP35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 ABCB11O95342 1321 aa35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 SSRP1Q08945 709 aaKnown RBP35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 PKN1Q16512 942 aa35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 MMP19Q99542 508 aa35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 GJD2Q9UKL4 321 aa35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 PNMA2Q9UL42 364 aa35.35■■■■□ 3.25
CSNK1E-206ENST00000413574 FCER1AP12319 257 aa35.34■■■■□ 3.25
CSNK1E-206ENST00000413574 PRKCZQ05513 592 aa35.34■■■■□ 3.25
CSNK1E-206ENST00000413574 HEATR3Q7Z4Q2 680 aa35.34■■■■□ 3.25
CSNK1E-206ENST00000413574 FBXO40Q9UH90 709 aa35.34■■■■□ 3.25
CSNK1E-206ENST00000413574 AKAP17AQ02040 695 aaKnown RBP35.33■■■■□ 3.25
CSNK1E-206ENST00000413574 GRB14Q14449 540 aa35.33■■■■□ 3.25
CSNK1E-206ENST00000413574 MORN1Q5T089 497 aa35.33■■■■□ 3.25
CSNK1E-206ENST00000413574 WWC2Q6AWC2 1192 aa35.33■■■■□ 3.25
CSNK1E-206ENST00000413574 RBBP6Q7Z6E9 1792 aaKnown RBP35.33■■■■□ 3.25
CSNK1E-206ENST00000413574 JAK2O60674 1132 aa35.32■■■■□ 3.25
CSNK1E-206ENST00000413574 KCTD2Q14681 263 aa35.32■■■■□ 3.25
CSNK1E-206ENST00000413574 TRIM22Q8IYM9 498 aa35.32■■■■□ 3.25
CSNK1E-206ENST00000413574 ANKRD35Q8N283 1001 aa35.32■■■■□ 3.25
CSNK1E-206ENST00000413574 NSUN7Q8NE18 718 aaKnown RBP35.32■■■■□ 3.25
CSNK1E-206ENST00000413574 TBC1D5Q92609 795 aa35.32■■■■□ 3.25
CSNK1E-206ENST00000413574 A1CFQ9NQ94 594 aaKnown RBP35.32■■■■□ 3.25
CSNK1E-206ENST00000413574 PRDM10Q9NQV6 1147 aa35.32■■■■□ 3.25
CSNK1E-206ENST00000413574 OPLAHO14841 1288 aa35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 STRNO43815 780 aa35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 CDKL5O76039 1030 aa35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 PGK2P07205 417 aa35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 ADORA2AP29274 412 aa35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 ARHGEF6Q15052 776 aa35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 PFKFB3Q16875 520 aaPredicted RBP35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 NSMFQ6X4W1 530 aa35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 SRRDQ9UH36 339 aa35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 MRPL11Q9Y3B7 192 aaKnown RBP35.32■■■■□ 3.24
CSNK1E-206ENST00000413574 SLC15A5A6NIM6 579 aa35.31■■■■□ 3.24
CSNK1E-206ENST00000413574 SCG2P13521 617 aa35.31■■■■□ 3.24
CSNK1E-206ENST00000413574 FLT3LGP49771 235 aa35.31■■■■□ 3.24
CSNK1E-206ENST00000413574 TYW1BQ6NUM6 668 aa35.31■■■■□ 3.24
CSNK1E-206ENST00000413574 PLXNA1Q9UIW2 1896 aa35.3■■■■□ 3.24
CSNK1E-206ENST00000413574 DDX11Q96FC9 970 aa35.3■■■■□ 3.24
CSNK1E-206ENST00000413574 NUDT12Q9BQG2 462 aa35.3■■■■□ 3.24
CSNK1E-206ENST00000413574 ZNF236Q9UL36 1845 aa35.3■■■■□ 3.24
CSNK1E-206ENST00000413574 PTPDC1A2A3K4 754 aa35.29■■■■□ 3.24
CSNK1E-206ENST00000413574 GNRH1P01148 92 aa35.29■■■■□ 3.24
CSNK1E-206ENST00000413574 USP6NLQ92738 828 aa35.29■■■■□ 3.24
CSNK1E-206ENST00000413574 LCTP09848 1927 aa35.29■■■■□ 3.24
CSNK1E-206ENST00000413574 COBLO75128 1261 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 HOXD10P28358 340 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 ABRAQ8N0Z2 381 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 AIFM3Q96NN9 605 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 RBM27Q9P2N5 1060 aaKnown RBP35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 STXBP3O00186 592 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 FDPSP14324 419 aaKnown RBP35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 CYP2B6P20813 491 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 TRAF1Q13077 416 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 MAP2K5Q13163 448 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 CTU1Q7Z7A3 348 aaKnown RBP35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 BARHL2Q9NY43 387 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 CYP39A1Q9NYL5 469 aa35.28■■■■□ 3.24
CSNK1E-206ENST00000413574 DEXIO95424 95 aa35.27■■■■□ 3.24
CSNK1E-206ENST00000413574 BAATQ14032 418 aaPredicted RBP35.27■■■■□ 3.24
CSNK1E-206ENST00000413574 SLC30A10Q6XR72 485 aa35.27■■■■□ 3.24
CSNK1E-206ENST00000413574 SOCS4Q8WXH5 440 aa35.27■■■■□ 3.24
CSNK1E-206ENST00000413574 PURBQ96QR8 312 aaKnown RBP35.27■■■■□ 3.24
CSNK1E-206ENST00000413574 ORC3Q9UBD5 711 aaPredicted RBP35.27■■■■□ 3.24
CSNK1E-206ENST00000413574 RNF207Q6ZRF8 634 aa35.26■■■■□ 3.24
CSNK1E-206ENST00000413574 DPP9Q86TI2 863 aa35.26■■■■□ 3.24
CSNK1E-206ENST00000413574 SNX21Q969T3 373 aa35.26■■■■□ 3.24
CSNK1E-206ENST00000413574 SHISA4Q96DD7 197 aa35.26■■■■□ 3.24
CSNK1E-206ENST00000413574 STK36Q9NRP7 1315 aa35.26■■■■□ 3.23
CSNK1E-206ENST00000413574 CFBP00751 764 aa35.25■■■■□ 3.23
CSNK1E-206ENST00000413574 NAPAP54920 295 aa35.25■■■■□ 3.23
CSNK1E-206ENST00000413574 RPS6P62753 249 aaKnown RBP35.25■■■■□ 3.23
CSNK1E-206ENST00000413574 NPLOC4Q8TAT6 608 aa35.25■■■■□ 3.23
CSNK1E-206ENST00000413574 CALML3P27482 149 aa35.24■■■■□ 3.23
CSNK1E-206ENST00000413574 CNTN2Q02246 1040 aa35.24■■■■□ 3.23
CSNK1E-206ENST00000413574 VPS54Q9P1Q0 977 aa35.24■■■■□ 3.23
CSNK1E-206ENST00000413574 DNAJC25-GNG10A0A024R161 153 aa35.24■■■■□ 3.23
CSNK1E-206ENST00000413574 RGS2P41220 211 aa35.24■■■■□ 3.23
CSNK1E-206ENST00000413574 SMARCC2Q8TAQ2 1214 aa35.24■■■■□ 3.23
CSNK1E-206ENST00000413574 LLPHQ9BRT6 129 aaKnown RBP35.24■■■■□ 3.23
CSNK1E-206ENST00000413574 PTPN22Q9Y2R2 807 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms