RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 BIRC3Q13489 604 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 MLXIPQ9HAP2 919 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 SMIM24O75264 130 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 CAVIN4Q5BKX8 364 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 STAG1Q8WVM7 1258 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 TEX13AQ9BXU3 409 aaPredicted RBP15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 PUS3Q9BZE2 481 aaKnown RBP15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 INTS9Q9NV88 658 aaKnown RBP15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 CPS1P31327 1500 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 ANKRD62A6NC57 917 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 SCP2P22307 547 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 PPARAQ07869 468 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 COL9A3Q14050 684 aaPredicted RBP15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 PTPAQ15257 358 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 CRACR2BQ8N4Y2 399 aaPredicted RBP15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 PPFIBP2Q8ND30 876 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 CTNNBL1Q8WYA6 563 aaPredicted RBP15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 FAM89AQ96GI7 184 aa15.32■□□□□ 0.04
CLTCL1-201ENST00000412649 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 FTCDO95954 541 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 ALDH3A1P30838 453 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 SEC24CP53992 1094 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CALCOCO2Q13137 446 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CUL4BQ13620 913 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CRYMQ14894 314 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 PLCB4Q15147 1175 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 UBE3CQ15386 1083 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CABP7Q86V35 215 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CCDC13Q8IYE1 715 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 ZNF444Q8N0Y2 327 aaPredicted RBP15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CNPY4Q8N129 248 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 P2RX5Q93086 422 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 DCAF5Q96JK2 942 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 ZIM3Q96PE6 472 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 PPLO60437 1756 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 KNDC1Q76NI1 1749 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CIAO1O76071 339 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 GCP02774 474 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CYB5R4Q7L1T6 521 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 KLHL29Q96CT2 875 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 HOMER3Q9NSC5 361 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 CAPN11Q9UMQ6 739 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 A0A1W2PQC6 194 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 PPP1R12AO14974 1030 aaPredicted RBP15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 SYF2O95926 243 aaKnown RBP15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 NAPAP54920 295 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 KRT79Q5XKE5 535 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 RAB3IPQ96QF0 476 aaPredicted RBP15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 ZSWIM5Q9P217 1185 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 LETM2Q2VYF4 491 aa15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 RNPC3Q96LT9 517 aaKnown RBP15.31■□□□□ 0.04
CLTCL1-201ENST00000412649 A0A0G2JLW4 131 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 TRIM49BA6NDI0 452 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 FAM107AO95990 144 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 IFNAR2P48551 515 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 PTGISQ16647 500 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 MGARPQ8TDB4 240 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 TNKSO95271 1327 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 CUL1Q13616 776 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 C6orf163Q5TEZ5 329 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 SYCE1Q8N0S2 351 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 MMGT1Q8N4V1 131 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 SGSM3Q96HU1 749 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 SH3GL3Q99963 347 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 BATF3Q9NR55 127 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 TBC1D10CQ8IV04 446 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 VCPKMTQ9H867 229 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 VAT1LQ9HCJ6 419 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 INTS13Q9NVM9 706 aa15.3■□□□□ 0.04
CLTCL1-201ENST00000412649 KIF3CO14782 793 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 SUN1O94901 812 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 PRCPP42785 496 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 HDLBPQ00341 1268 aaKnown RBP15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 DHX9Q08211 1270 aaKnown RBP15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 PTPROQ16827 1216 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 CAPRIN2Q6IMN6 1127 aaKnown RBP15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 ARL8AQ96BM9 186 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 RRP36Q96EU6 259 aaKnown RBP15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 AGXT2Q9BYV1 514 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 HPS5Q9UPZ3 1129 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 PPP2R2AP63151 447 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 TAF11Q15544 211 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 CYB5D1Q6P9G0 228 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 PI16Q6UXB8 463 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 STX8Q9UNK0 236 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 FLOT1O75955 427 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 ITGA6P23229 1130 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 ADD2P35612 726 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 TRAPPC10P48553 1259 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 TMEM139Q8IV31 216 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 SMCR8Q8TEV9 937 aaPredicted RBP15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 TBC1D5Q92609 795 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 CYFIP2Q96F07 1278 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 THOC1Q96FV9 657 aaKnown RBP15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 KLHL14Q9P2G3 628 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 NCK2O43639 380 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 LSM14BQ9BX40 385 aaKnown RBP15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 CRNKL1Q9BZJ0 848 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 426.8 ms