RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 BRCA2P51587 3418 aa20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 KIF5BP33176 963 aa20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 GJA8P48165 433 aa20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 CTCFLQ8NI51 663 aaPredicted RBP20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 U2AF1L4Q8WU68 220 aaKnown RBP20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 SNX21Q969T3 373 aa20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 TCEANC2Q96MN5 208 aa20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 MYL10Q9BUA6 226 aa20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 A1CFQ9NQ94 594 aaKnown RBP20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 PDE4DIPQ5VU43 2346 aa20.31■□□□□ 0.84
SMIM11A-202ENST00000399295 POTEB2H3BUK9 544 aa20.3■□□□□ 0.84
SMIM11A-202ENST00000399295 SGPL1O95470 568 aa20.3■□□□□ 0.84
SMIM11A-202ENST00000399295 PSMA5P28066 241 aa20.3■□□□□ 0.84
SMIM11A-202ENST00000399295 QRICH1Q2TAL8 776 aa20.3■□□□□ 0.84
SMIM11A-202ENST00000399295 BLOC1S2Q6QNY1 142 aa20.3■□□□□ 0.84
SMIM11A-202ENST00000399295 SGMS1Q86VZ5 419 aa20.3■□□□□ 0.84
SMIM11A-202ENST00000399295 TINF2Q9BSI4 451 aa20.3■□□□□ 0.84
SMIM11A-202ENST00000399295 PFASO15067 1338 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 ZNFX1Q9P2E3 1918 aaKnown RBP20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 CALM1P0DP23 149 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 CALM2P0DP24 149 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 CALM3P0DP25 149 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 CPA1P15085 419 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 CCND3P30281 292 aaPredicted RBP20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 FGD1P98174 961 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 USH1GQ495M9 461 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 NSMFQ6X4W1 530 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 SYNE3Q6ZMZ3 975 aa20.29■□□□□ 0.84
SMIM11A-202ENST00000399295 NFIBO00712 420 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 ST18O60284 1047 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 TFRCP02786 760 aaKnown RBP20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 CNTN2Q02246 1040 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 ZNF467Q7Z7K2 595 aaPredicted RBP20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 FBXO11Q86XK2 927 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 HSCBQ8IWL3 235 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 MSL3Q8N5Y2 521 aaKnown RBP20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 FAM133AQ8N9E0 248 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 CLEC4DQ8WXI8 215 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 MTMR8Q96EF0 704 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 CYP39A1Q9NYL5 469 aa20.28■□□□□ 0.84
SMIM11A-202ENST00000399295 ZBTB5O15062 677 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 CYBAP13498 195 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 RXRAP19793 462 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 CASTP20810 708 aaKnown RBP20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 RPS6KB1P23443 525 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 CNGA1P29973 690 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 GNAQP50148 359 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 SLC35G1Q2M3R5 365 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 PRAMEF19Q5SWL8 479 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 RAB11FIP4Q86YS3 637 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 CCDC144CPQ8IYA2 1237 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 TRPV1Q8NER1 839 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 SHISA4Q96DD7 197 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 LZTS2Q9BRK4 669 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 AMNQ9BXJ7 453 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 TM6SF1Q9BZW5 370 aa20.27■□□□□ 0.84
SMIM11A-202ENST00000399295 ABCB11O95342 1321 aa20.27■□□□□ 0.83
SMIM11A-202ENST00000399295 PTPDC1A2A3K4 754 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 CYTH3O43739 400 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 BAATQ14032 418 aaPredicted RBP20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 APOA5Q6Q788 366 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 MAMDC4Q6UXC1 1216 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 MICU3Q86XE3 530 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 ANKLE1Q8NAG6 615 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 FANCBQ8NB91 859 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 PIGSQ96S52 555 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 CRISPLD2Q9H0B8 497 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 NRBP1Q9UHY1 535 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 BRPF3Q9ULD4 1205 aa20.26■□□□□ 0.83
SMIM11A-202ENST00000399295 SOWAHBA6NEL2 793 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 MSCO60682 206 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 SMARCA1P28370 1054 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 MCM2P49736 904 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 RNF207Q6ZRF8 634 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 Q6ZUG5 572 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 FGD4Q96M96 766 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 ZSWIM6Q9HCJ5 1215 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 CNPY2Q9Y2B0 182 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 MRPL11Q9Y3B7 192 aaKnown RBP20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 SYNGAP1Q96PV0 1343 aa20.25■□□□□ 0.83
SMIM11A-202ENST00000399295 PNMA6FA0A0J9YX94 578 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 KLF18A0A0U1RQI7 1052 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 ZBTB43O43298 467 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 PPP1R11O60927 126 aaPredicted RBP20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 PLEKHA8P1O95397 391 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 CALML3P27482 149 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 TRAF1Q13077 416 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 LHX8Q68G74 356 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 RUFY3Q7L099 469 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 RGS22Q8NE09 1264 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 SPZ1Q9BXG8 430 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 DDX20Q9UHI6 824 aaKnown RBP20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 PCDHA1Q9Y5I3 950 aa20.24■□□□□ 0.83
SMIM11A-202ENST00000399295 SEPT4O43236 478 aa20.23■□□□□ 0.83
SMIM11A-202ENST00000399295 SNAI1O95863 264 aaPredicted RBP20.23■□□□□ 0.83
SMIM11A-202ENST00000399295 RPS6P62753 249 aaKnown RBP20.23■□□□□ 0.83
SMIM11A-202ENST00000399295 SLC30A10Q6XR72 485 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms