RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TRAF1Q13077 416 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 SF3A1Q15459 793 aaKnown RBP31.48■■■□□ 2.63
CPNE1-203ENST00000397442 TMEM260Q9NX78 707 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 WNT7AO00755 349 aa31.47■■■□□ 2.63
CPNE1-203ENST00000397442 YEATS4O95619 227 aa31.47■■■□□ 2.63
CPNE1-203ENST00000397442 MRPL12P52815 198 aaKnown RBP31.47■■■□□ 2.63
CPNE1-203ENST00000397442 PTPAQ15257 358 aa31.47■■■□□ 2.63
CPNE1-203ENST00000397442 GADL1Q6ZQY3 521 aa31.47■■■□□ 2.63
CPNE1-203ENST00000397442 AGBL1Q96MI9 1066 aa31.47■■■□□ 2.63
CPNE1-203ENST00000397442 PCDHB6Q9Y5E3 794 aa31.47■■■□□ 2.63
CPNE1-203ENST00000397442 PASKQ96RG2 1323 aa31.47■■■□□ 2.63
CPNE1-203ENST00000397442 COL11A1P12107 1806 aaPredicted RBP31.47■■■□□ 2.63
CPNE1-203ENST00000397442 CCDC194A0A1B0GVG4 234 aa31.46■■■□□ 2.63
CPNE1-203ENST00000397442 FDX1P10109 184 aa31.46■■■□□ 2.63
CPNE1-203ENST00000397442 UBE2SQ16763 222 aa31.46■■■□□ 2.63
CPNE1-203ENST00000397442 KRT25Q7Z3Z0 450 aa31.46■■■□□ 2.63
CPNE1-203ENST00000397442 REPS2Q8NFH8 660 aa31.46■■■□□ 2.63
CPNE1-203ENST00000397442 MEIS2O14770 477 aa31.45■■■□□ 2.63
CPNE1-203ENST00000397442 HOXA7P31268 230 aaPredicted RBP31.45■■■□□ 2.63
CPNE1-203ENST00000397442 JAKMIP3Q5VZ66 844 aa31.45■■■□□ 2.63
CPNE1-203ENST00000397442 GLT8D2Q9H1C3 349 aa31.45■■■□□ 2.63
CPNE1-203ENST00000397442 MYPNQ86TC9 1320 aa31.45■■■□□ 2.63
CPNE1-203ENST00000397442 TRAPPC10P48553 1259 aa31.44■■■□□ 2.62
CPNE1-203ENST00000397442 SLC39A14Q15043 492 aa31.44■■■□□ 2.62
CPNE1-203ENST00000397442 NOL7Q9UMY1 257 aaKnown RBP31.44■■■□□ 2.62
CPNE1-203ENST00000397442 SPDYE16A6NNV3 312 aaPredicted RBP31.44■■■□□ 2.62
CPNE1-203ENST00000397442 ZBED4O75132 1171 aa31.44■■■□□ 2.62
CPNE1-203ENST00000397442 USP17L6PQ6QN14 398 aa31.44■■■□□ 2.62
CPNE1-203ENST00000397442 PGBD1Q96JS3 809 aa31.44■■■□□ 2.62
CPNE1-203ENST00000397442 RAVER2Q9HCJ3 691 aaKnown RBP31.44■■■□□ 2.62
CPNE1-203ENST00000397442 CCPG1Q9ULG6 757 aa31.44■■■□□ 2.62
CPNE1-203ENST00000397442 ABCB11O95342 1321 aa31.43■■■□□ 2.62
CPNE1-203ENST00000397442 ATP2B1P20020 1258 aa31.43■■■□□ 2.62
CPNE1-203ENST00000397442 SNAPC2Q13487 334 aa31.43■■■□□ 2.62
CPNE1-203ENST00000397442 HOXC10Q9NYD6 342 aa31.43■■■□□ 2.62
CPNE1-203ENST00000397442 AGTPBP1Q9UPW5 1226 aa31.43■■■□□ 2.62
CPNE1-203ENST00000397442 STK38Q15208 465 aa31.42■■■□□ 2.62
CPNE1-203ENST00000397442 NONOQ15233 471 aaKnown RBP eCLIP31.42■■■□□ 2.62
CPNE1-203ENST00000397442 INF2Q27J81 1249 aa31.42■■■□□ 2.62
CPNE1-203ENST00000397442 CPXCR1Q8N123 301 aa31.42■■■□□ 2.62
CPNE1-203ENST00000397442 GPT2Q8TD30 523 aa31.42■■■□□ 2.62
CPNE1-203ENST00000397442 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.42■■■□□ 2.62
CPNE1-203ENST00000397442 TRAK2O60296 914 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 UBE2HP62256 183 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 TTC38Q5R3I4 469 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 GPAT2Q6NUI2 795 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 FASTKD5Q7L8L6 764 aaKnown RBP31.41■■■□□ 2.62
CPNE1-203ENST00000397442 P2RX7Q99572 595 aaKnown RBP31.41■■■□□ 2.62
CPNE1-203ENST00000397442 MRPL11Q9Y3B7 192 aaKnown RBP31.41■■■□□ 2.62
CPNE1-203ENST00000397442 SPTLC2O15270 562 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 POTEEQ6S8J3 1075 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 KCNG4Q8TDN1 519 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 MS4A4AQ96JQ5 239 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 A0A0G2JMZ2 1700 aa31.41■■■□□ 2.62
CPNE1-203ENST00000397442 ZNF214Q9UL59 606 aaPredicted RBP31.4■■■□□ 2.62
CPNE1-203ENST00000397442 PIK3CDO00329 1044 aa31.39■■■□□ 2.62
CPNE1-203ENST00000397442 OAZ1P54368 228 aa31.39■■■□□ 2.62
CPNE1-203ENST00000397442 HUNKP57058 714 aa31.39■■■□□ 2.62
CPNE1-203ENST00000397442 SPRYD7Q5W111 196 aa31.39■■■□□ 2.62
CPNE1-203ENST00000397442 TEX2Q8IWB9 1127 aa31.39■■■□□ 2.62
CPNE1-203ENST00000397442 TBCKQ8TEA7 893 aa31.39■■■□□ 2.62
CPNE1-203ENST00000397442 TBC1D5Q92609 795 aa31.39■■■□□ 2.62
CPNE1-203ENST00000397442 ATP2A1O14983 1001 aa31.38■■■□□ 2.61
CPNE1-203ENST00000397442 TMEM132BQ14DG7 1078 aa31.38■■■□□ 2.61
CPNE1-203ENST00000397442 CLEC4DQ8WXI8 215 aa31.38■■■□□ 2.61
CPNE1-203ENST00000397442 PNMA2Q9UL42 364 aa31.38■■■□□ 2.61
CPNE1-203ENST00000397442 PCDHA7Q9UN72 937 aa31.38■■■□□ 2.61
CPNE1-203ENST00000397442 CTDP1Q9Y5B0 961 aaPredicted RBP31.38■■■□□ 2.61
CPNE1-203ENST00000397442 EDIL3O43854 480 aa31.38■■■□□ 2.61
CPNE1-203ENST00000397442 ZNF174Q15697 407 aa31.38■■■□□ 2.61
CPNE1-203ENST00000397442 SKOR2Q2VWA4 1001 aaPredicted RBP31.38■■■□□ 2.61
CPNE1-203ENST00000397442 ASCC2Q9H1I8 757 aaPredicted RBP31.38■■■□□ 2.61
CPNE1-203ENST00000397442 DDX49Q9Y6V7 483 aaKnown RBP31.38■■■□□ 2.61
CPNE1-203ENST00000397442 PPP6R2O75170 966 aa31.37■■■□□ 2.61
CPNE1-203ENST00000397442 ZBTB48P10074 688 aaPredicted RBP31.37■■■□□ 2.61
CPNE1-203ENST00000397442 MARCKSP29966 332 aaPredicted RBP31.37■■■□□ 2.61
CPNE1-203ENST00000397442 SMC1BQ8NDV3 1235 aa31.37■■■□□ 2.61
CPNE1-203ENST00000397442 MORC2Q9Y6X9 1032 aaPredicted RBP31.37■■■□□ 2.61
CPNE1-203ENST00000397442 MYH7BA7E2Y1 1941 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 ALAS1P13196 640 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 HOXA13P31271 388 aaPredicted RBP31.36■■■□□ 2.61
CPNE1-203ENST00000397442 ME1P48163 572 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 GTF2A2P52657 109 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 MKRN3Q13064 507 aaKnown RBP31.36■■■□□ 2.61
CPNE1-203ENST00000397442 AP3B2Q13367 1082 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 KLHL40Q2TBA0 621 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 NEK8Q86SG6 692 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 SAPCD2Q86UD0 394 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 RIPK3Q9Y572 518 aa31.36■■■□□ 2.61
CPNE1-203ENST00000397442 MUM1L1Q5H9M0 696 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 LBX2Q6XYB7 198 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 CEP131Q9UPN4 1083 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 MRVI1Q9Y6F6 885 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 NFIBO00712 420 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 CFBP00751 764 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 CETPP11597 493 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 IRX3P78415 501 aaPredicted RBP31.35■■■□□ 2.61
CPNE1-203ENST00000397442 GHRHRQ02643 423 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 TPRNQ4KMQ1 711 aa31.35■■■□□ 2.61
CPNE1-203ENST00000397442 AXDND1Q5T1B0 1012 aaPredicted RBP31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms