RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 EBF1Q9UH73 591 aa6.5□□□□□ -1.37
USP48-202ENST00000374730 DDX41Q9UJV9 622 aaKnown RBP6.5□□□□□ -1.37
USP48-202ENST00000374730 TCFL5Q9UL49 500 aa6.5□□□□□ -1.37
USP48-202ENST00000374730 PCDHGB7Q9Y5F8 929 aa6.5□□□□□ -1.37
USP48-202ENST00000374730 RNF17Q9BXT8 1623 aaKnown RBP6.5□□□□□ -1.37
USP48-202ENST00000374730 KIF7Q2M1P5 1343 aa6.5□□□□□ -1.37
USP48-202ENST00000374730 ROCK2O75116 1388 aaKnown RBP6.49□□□□□ -1.37
USP48-202ENST00000374730 ENDOUP21128 410 aaKnown RBP6.49□□□□□ -1.37
USP48-202ENST00000374730 COL9A2Q14055 689 aaPredicted RBP6.49□□□□□ -1.37
USP48-202ENST00000374730 BBS9Q3SYG4 887 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 TIGD5Q53EQ6 642 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 CILP2Q8IUL8 1156 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 RBBP8NLQ8NC74 664 aaPredicted RBP6.49□□□□□ -1.37
USP48-202ENST00000374730 RGS22Q8NE09 1264 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 MAP6Q96JE9 813 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 DHRS1Q96LJ7 313 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 TM9SF2Q99805 663 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 SUCOQ9UBS9 1254 aaKnown RBP6.49□□□□□ -1.37
USP48-202ENST00000374730 YBX2Q9Y2T7 364 aaKnown RBP6.49□□□□□ -1.37
USP48-202ENST00000374730 PCDHB12Q9Y5F1 795 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 CEP152O94986 1710 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 RTEL1-TNFRSF6BF6WH68 1400 aa6.49□□□□□ -1.37
USP48-202ENST00000374730 PLA2R1Q13018 1463 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 WDR7Q9Y4E6 1490 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 SPHKAPQ2M3C7 1700 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 SSU72P8A0A1W2PR75 194 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 TMEM82A0PJX8 343 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 ACRP10323 421 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 RPL10P27635 214 aaKnown RBP6.48□□□□□ -1.37
USP48-202ENST00000374730 KIR2DL1P43626 348 aaPredicted RBP6.48□□□□□ -1.37
USP48-202ENST00000374730 KIR2DL2P43627 348 aaPredicted RBP6.48□□□□□ -1.37
USP48-202ENST00000374730 RACK1P63244 317 aaKnown RBP6.48□□□□□ -1.37
USP48-202ENST00000374730 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 WAPLQ7Z5K2 1190 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
USP48-202ENST00000374730 INTS4Q96HW7 963 aaKnown RBP6.48□□□□□ -1.37
USP48-202ENST00000374730 SPATA32Q96LK8 384 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 FERD3LQ96RJ6 166 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 SLC26A8Q96RN1 970 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 CHST7Q9NS84 486 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 PRDM15P57071 1507 aaPredicted RBP6.48□□□□□ -1.37
USP48-202ENST00000374730 CCDC144AA2RUR9 1427 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 TET3O43151 1660 aa6.48□□□□□ -1.37
USP48-202ENST00000374730 GPRASP1Q5JY77 1395 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 DHX29Q7Z478 1369 aaKnown RBP6.47□□□□□ -1.37
USP48-202ENST00000374730 NFIBO00712 420 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 KRT1P04264 644 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 SYPP08247 313 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 MED14OSP0DP75 135 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 BMP8BP34820 402 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 PMS1P54277 932 aaKnown RBP6.47□□□□□ -1.37
USP48-202ENST00000374730 AUHQ13825 339 aaKnown RBP6.47□□□□□ -1.37
USP48-202ENST00000374730 EFCAB2Q5VUJ9 269 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 ZNF654Q8IZM8 581 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 FCRL2Q96LA5 508 aaPredicted RBP6.47□□□□□ -1.37
USP48-202ENST00000374730 TOX2Q96NM4 488 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 PRKRIP1Q9H875 184 aaPredicted RBP6.47□□□□□ -1.37
USP48-202ENST00000374730 GPR160Q9UJ42 338 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 ZMYM5Q9UJ78 669 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 PRAG1Q86YV5 1406 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 VWDEQ8N2E2 1590 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 NEURL4Q96JN8 1562 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 A2MP01023 1474 aa6.47□□□□□ -1.37
USP48-202ENST00000374730 TRPM2O94759 1503 aa6.46□□□□□ -1.37
USP48-202ENST00000374730 ATP7AQ04656 1500 aa6.46□□□□□ -1.37
USP48-202ENST00000374730 NRDCO43847 1150 aa6.46□□□□□ -1.38
USP48-202ENST00000374730 GLDCP23378 1020 aa6.46□□□□□ -1.38
USP48-202ENST00000374730 NLRX1Q86UT6 975 aa6.46□□□□□ -1.38
USP48-202ENST00000374730 METTL16Q86W50 562 aaKnown RBP6.46□□□□□ -1.38
USP48-202ENST00000374730 SHISA4Q96DD7 197 aa6.46□□□□□ -1.38
USP48-202ENST00000374730 CFAP74Q9C0B2 1584 aa6.46□□□□□ -1.38
USP48-202ENST00000374730 GFOD1Q9NXC2 390 aa6.46□□□□□ -1.38
USP48-202ENST00000374730 FBXL21Q9UKT6 434 aa6.46□□□□□ -1.38
USP48-202ENST00000374730 KIAA1210Q9ULL0 1709 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 TRAPPC8Q9Y2L5 1435 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 NOTOA8MTQ0 251 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 PSPNO60542 156 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 PEX10O60683 326 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 USP2O75604 605 aaPredicted RBP6.45□□□□□ -1.38
USP48-202ENST00000374730 ZNF205O95201 554 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 TMEM253P0C7T8 217 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 C1QTNF9P0C862 333 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 ANKLE2Q86XL3 938 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 C7orf61Q8IZ16 206 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 HHIPL1Q96JK4 782 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 CRTAC1Q9NQ79 661 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 MADDQ8WXG6 1647 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 IQGAP1P46940 1657 aa6.45□□□□□ -1.38
USP48-202ENST00000374730 KTN1Q86UP2 1357 aaKnown RBP6.44□□□□□ -1.38
USP48-202ENST00000374730 MROH1Q8NDA8 1641 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 C9IYK1 514 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 FKTNO75072 461 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 GUCY2CP25092 1073 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 CTSKP43235 329 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 PAK2Q13177 524 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 SLC14A2Q15849 920 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 LSRQ86X29 649 aaPredicted RBP6.44□□□□□ -1.38
USP48-202ENST00000374730 CCDC144CPQ8IYA2 1237 aa6.44□□□□□ -1.38
USP48-202ENST00000374730 RASGRP4Q8TDF6 673 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms