RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 PHKBQ93100 1093 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 COA7Q96BR5 231 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 C12orf42Q96LP6 360 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 SPZ1Q9BXG8 430 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 PORCNQ9H237 461 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 FLRT1Q9NZU1 646 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 RBPJLQ9UBG7 517 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 CIZ1Q9ULV3 898 aaPredicted RBP7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 PLXNB2O15031 1838 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 PFASO15067 1338 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 H3BQV1 296 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 PPFIA3O75145 1194 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 XBP1P17861 261 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 CACNB2Q08289 660 aaPredicted RBP7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 FUT2Q10981 343 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 TRIM29Q14134 588 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 LRRC26Q2I0M4 334 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 FAM83BQ5T0W9 1011 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 ANO1Q5XXA6 986 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 FAM160B2Q86V87 743 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 CMTR1Q8N1G2 835 aaKnown RBP7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 CCDC82Q8N4S0 544 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 SRBD1Q8N5C6 995 aaKnown RBP7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 RRP36Q96EU6 259 aaKnown RBP7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 NUP88Q99567 741 aaPredicted RBP7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 ALG1Q9BT22 464 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 PAGR1Q9BTK6 254 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 TANGO6Q9C0B7 1094 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 C11orf49Q9H6J7 331 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 GPCPD1Q9NPB8 672 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 MTMR10Q9NXD2 777 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 FEM1BQ9UK73 627 aa7.82□□□□□ -1.16
RNU1-55P-201ENST00000365510 TMEM232C9JQI7 657 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 RBAK-RBAKDNI3L0D1 243 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 hCG_1984214I3L0E3 225 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 PRPF3O43395 683 aaKnown RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 PLA2G6O60733 806 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 CNMDO75829 334 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 FLOT1O75955 427 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 PRKAR2AP13861 404 aaKnown RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 ATN1P54259 1190 aaPredicted RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 NUCB2P80303 420 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 SH3D19Q5HYK7 790 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 KIAA1755Q5JYT7 1200 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 SYDE2Q5VT97 1194 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 LARP1BQ659C4 914 aaKnown RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 LHX8Q68G74 356 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 HOMER1Q86YM7 354 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 ZNF713Q8N859 430 aaPredicted RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 CCDC148Q8NFR7 591 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 CCDC12Q8WUD4 166 aaPredicted RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 CHURC1Q8WUH1 139 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 PIBF1Q8WXW3 757 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 C8orf76Q96K31 380 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 SLF1Q9BQI6 1058 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 UBE2OQ9C0C9 1292 aaKnown RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 RPAP3Q9H6T3 665 aaPredicted RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 RIOX1Q9H6W3 641 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 HMX1Q9NP08 348 aaPredicted RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 EMILIN3Q9NT22 766 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 CHMP5Q9NZZ3 219 aa7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 V9GY48 417 aaPredicted RBP7.81□□□□□ -1.16
RNU1-55P-201ENST00000365510 RPTORQ8N122 1335 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 LOC285556D6RIA3 1793 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 VPS37CA5D8V6 355 aaPredicted RBP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 ZBTB5O15062 677 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 CYTH3O43739 400 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 STX6O43752 255 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 HMGCRP04035 888 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 SCG2P13521 617 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 FDPSP14324 419 aaKnown RBP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 SYT1P21579 422 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 DDIT3P35638 169 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 SLC16A2P36021 539 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 FOSBP53539 338 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 TRAF1Q13077 416 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 PABPC4Q13310 644 aaKnown RBP eCLIP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 CDC37Q16543 378 aaPredicted RBP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 PFKFB3Q16875 520 aaPredicted RBP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 FAM110CQ1W6H9 321 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 PRAMEF19Q5SWL8 479 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 TTBK2Q6IQ55 1244 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 BTNL9Q6UXG8 535 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 HEATR3Q7Z4Q2 680 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 ADGRF4Q8IZF3 695 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 FAM177A1Q8N128 213 aaPredicted RBP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 PROCA1Q8NCQ7 364 aaPredicted RBP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 RGS22Q8NE09 1264 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 TRPV1Q8NER1 839 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 NPLOC4Q8TAT6 608 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 COL25A1Q9BXS0 654 aaPredicted RBP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 UBA5Q9GZZ9 404 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 CPVLQ9H3G5 476 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 BRMS1Q9HCU9 246 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 OGDHLQ9ULD0 1010 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 SLC45A1Q9Y2W3 748 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 CTDP1Q9Y5B0 961 aaPredicted RBP7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 CUL9Q8IWT3 2517 aa7.8□□□□□ -1.16
RNU1-55P-201ENST00000365510 PNMA6FA0A0J9YX94 578 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms