RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 HCN4Q9Y3Q4 1203 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 MRVI1Q9Y6F6 885 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 CXCL11O14625 94 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 CTNND1O60716 968 aaKnown RBP4.39□□□□□ -1.71
SMC1B-201ENST00000357450 HMGCRP04035 888 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 PGK2P07205 417 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 SNAP25P60880 206 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 COG2Q14746 738 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 IMMTQ16891 758 aaKnown RBP4.39□□□□□ -1.71
SMC1B-201ENST00000357450 BEND3Q5T5X7 828 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 SLFN13Q68D06 897 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 DYNLL2Q96FJ2 89 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 ARHGAP39Q9C0H5 1083 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 IGFLR1Q9H665 355 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 XPNPEP3Q9NQH7 507 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 PTPRFP10586 1907 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 MYO7AQ13402 2215 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 GREB1Q4ZG55 1949 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 C10orf71Q711Q0 1435 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 ZNF532Q9HCE3 1301 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 SSBP05455 408 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 LACTBP83111 547 aaPredicted RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 TFAP4Q01664 338 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 PPIL2Q13356 520 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 TRIM29Q14134 588 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 TAF12Q16514 161 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 ALDH1L2Q3SY69 923 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 PRAMEF19Q5SWL8 479 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 FAM83BQ5T0W9 1011 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 OTOP2Q7RTS6 562 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 RHPN1Q8TCX5 695 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 MED15Q96RN5 788 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 KCNK17Q96T54 332 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 NUP88Q99567 741 aaPredicted RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 P2RX7Q99572 595 aaKnown RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 ASCC2Q9H1I8 757 aaPredicted RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 ZHX3Q9H4I2 956 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 RNF41Q9H4P4 317 aaPredicted RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 ADD3Q9UEY8 706 aaKnown RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 POLIQ9UNA4 740 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 IGF2BP3O00425 579 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 CTSHP09668 335 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 PTPREP23469 700 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 HERVK_113P62684 666 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 TNNI3KQ59H18 835 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 ARHGEF16Q5VV41 709 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 CEP85Q6P2H3 762 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 UBE2Q2Q8WVN8 375 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 FAM49AQ9H0Q0 323 aaPredicted RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 FPGT-TNNI3KV9GXZ4 949 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 APC2O95996 2303 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 LARGE1O95461 756 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 TSGA10IPQ3SY00 556 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 BMP2KLQ5H9B9 411 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 RNF20Q5VTR2 975 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 MCTP1Q6DN14 999 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 PPP4R3AQ6IN85 833 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 METTL13Q8N6R0 699 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 SLC44A5Q8NCS7 719 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 PPP1R16BQ96T49 567 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 MFSD1Q9H3U5 465 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 AZI2Q9H6S1 392 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 VPS13AQ96RL7 3174 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 FRMPD2Q68DX3 1309 aaPredicted RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 CYP2D7A0A087X1C5 515 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 C19orf81C9J6K1 198 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 DDX39AO00148 427 aaKnown RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 USP2O75604 605 aaPredicted RBP4.38□□□□□ -1.71
SMC1B-201ENST00000357450 KCTD1Q719H9 257 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 C7orf31Q8N865 590 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 C11orf49Q9H6J7 331 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 EHMT1Q9H9B1 1298 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 ECHDC1Q9NTX5 307 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 HMG20BQ9P0W2 317 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 CTNNA3Q9UI47 895 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 PTPN22Q9Y2R2 807 aa4.38□□□□□ -1.71
SMC1B-201ENST00000357450 SPDYE3A6NKU9 549 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 MYBP10242 640 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 ERCC3P19447 782 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 SLC16A2P36021 539 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 PRMT2P55345 433 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 CERS3Q8IU89 383 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 CLEC10AQ8IUN9 316 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 FAM200AQ8TCP9 573 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 ARID3AQ99856 593 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 KANSL2Q9H9L4 492 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 HERC5Q9UII4 1024 aaKnown RBP4.37□□□□□ -1.71
SMC1B-201ENST00000357450 PDCD11Q14690 1871 aaKnown RBP4.37□□□□□ -1.71
SMC1B-201ENST00000357450 NBPF19A0A087WUL8 3843 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 PEX10O60683 326 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 SLURP2P0DP57 97 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 GTF2F1P35269 517 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMC1B-201ENST00000357450 HHIPL2Q6UWX4 724 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMC1B-201ENST00000357450 DNAJC5GQ8N7S2 189 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 OLIG1Q8TAK6 271 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 SOCS4Q8WXH5 440 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 ARNTL2Q8WYA1 636 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 ESR2Q92731 530 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms