RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 OR2W6PQ8NHA6 318 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 PHF20Q9BVI0 1012 aa18.65■□□□□ 0.58
CTDP1-201ENST00000075430 EPHB6O15197 1021 aa18.64■□□□□ 0.57
CTDP1-201ENST00000075430 GFPT1Q06210 699 aaPredicted RBP18.64■□□□□ 0.57
CTDP1-201ENST00000075430 IFT88Q13099 833 aa18.64■□□□□ 0.57
CTDP1-201ENST00000075430 SPATA20Q8TB22 786 aa18.64■□□□□ 0.57
CTDP1-201ENST00000075430 TRIM31Q9BZY9 425 aa18.64■□□□□ 0.57
CTDP1-201ENST00000075430 KCNQ2O43526 872 aa18.64■□□□□ 0.57
CTDP1-201ENST00000075430 PRPF6O94906 941 aaKnown RBP18.64■□□□□ 0.57
CTDP1-201ENST00000075430 ANKRD40Q6AI12 368 aa18.64■□□□□ 0.57
CTDP1-201ENST00000075430 A0A087WUV0 522 aaPredicted RBP18.63■□□□□ 0.57
CTDP1-201ENST00000075430 SMIM23A6NLE4 172 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 CARSP49589 748 aaKnown RBP18.63■□□□□ 0.57
CTDP1-201ENST00000075430 CHRNDQ07001 517 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 CFAP58Q5T655 872 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 EFCAB13Q8IY85 973 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 FAM205AQ6ZU69 1335 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 STK36Q9NRP7 1315 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 AFDNP55196 1824 aaKnown RBP18.63■□□□□ 0.57
CTDP1-201ENST00000075430 HGSO14964 777 aaPredicted RBP18.63■□□□□ 0.57
CTDP1-201ENST00000075430 MARCH6O60337 910 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 FAM153BP0C7A2 387 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 NNTQ13423 1086 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 FAM153CQ494X1 144 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 SPATA4Q8NEY3 305 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 STAG1Q8WVM7 1258 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 GJA10Q969M2 543 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 DYNLL2Q96FJ2 89 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 CCDC87Q9NVE4 849 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 FAM153AQ9UHL3 310 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 LGALS16A8MUM7 142 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 H7C1D1 291 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 SCG2P13521 617 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 TXKP42681 527 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
CTDP1-201ENST00000075430 FAM212AQ96EL1 285 aa18.63■□□□□ 0.57
CTDP1-201ENST00000075430 RBM12Q9NTZ6 932 aaKnown RBP18.63■□□□□ 0.57
CTDP1-201ENST00000075430 KRT12Q99456 494 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 RMND1Q9NWS8 449 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 E7EVH7 732 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 NKX1-1Q15270 411 aaPredicted RBP18.62■□□□□ 0.57
CTDP1-201ENST00000075430 SH3RF1Q7Z6J0 888 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 MCM9Q9NXL9 1143 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 WDR19Q8NEZ3 1342 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 EHHADHQ08426 723 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 TRIM28Q13263 835 aaKnown RBP18.62■□□□□ 0.57
CTDP1-201ENST00000075430 WDR93Q6P2C0 686 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 PDXDC2PQ6P474 469 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 EP400NLQ6ZTU2 488 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 ADAT2Q7Z6V5 191 aaKnown RBP18.62■□□□□ 0.57
CTDP1-201ENST00000075430 KIRREL3Q8IZU9 778 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 CD248Q9HCU0 757 aa18.62■□□□□ 0.57
CTDP1-201ENST00000075430 ZNF263O14978 683 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 CCNT1O60563 726 aaKnown RBP18.61■□□□□ 0.57
CTDP1-201ENST00000075430 HNRNPH1P31943 449 aaKnown RBP18.61■□□□□ 0.57
CTDP1-201ENST00000075430 ATP2C1P98194 919 aaPredicted RBP18.61■□□□□ 0.57
CTDP1-201ENST00000075430 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
CTDP1-201ENST00000075430 C5P01031 1676 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 PLCG1P19174 1290 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 FAM184BQ9ULE4 1060 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 LOC102724428A0A0B4J2F2 783 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 PSMD14O00487 310 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 MCM3P25205 808 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 SIK1P57059 783 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 SETQ01105 290 aaPredicted RBP18.61■□□□□ 0.57
CTDP1-201ENST00000075430 TUBB2AQ13885 445 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 CEP85LQ5SZL2 805 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 MMS22LQ6ZRQ5 1243 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 NELFCDQ8IXH7 590 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 SLC44A5Q8NCS7 719 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 SCLT1Q96NL6 688 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 ZIM3Q96PE6 472 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 TUBB2BQ9BVA1 445 aa18.61■□□□□ 0.57
CTDP1-201ENST00000075430 USP17L3A6NCW0 530 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 USP17L4A6NCW7 530 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 GUCY2CP25092 1073 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 DNM2P50570 870 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 CAVIN4Q5BKX8 364 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 USP17L1Q7RTZ2 530 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 DDX42Q86XP3 938 aaKnown RBP eCLIP18.6■□□□□ 0.57
CTDP1-201ENST00000075430 DISC1Q9NRI5 854 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 MYO1AQ9UBC5 1043 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 SAP30BPQ9UHR5 308 aaKnown RBP18.6■□□□□ 0.57
CTDP1-201ENST00000075430 PCDHA13Q9Y5I0 950 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 HEXIM1O94992 359 aaKnown RBP18.6■□□□□ 0.57
CTDP1-201ENST00000075430 KIF11P52732 1056 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 PPFIA1Q13136 1202 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 E2F5Q15329 346 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 OSBPL9Q96SU4 736 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 USP17L8P0C7I0 530 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 TRIM14Q14142 442 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 KSR1Q8IVT5 923 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 BLIDQ8IZY5 108 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 ADSSL1Q8N142 457 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 MKNK2Q9HBH9 465 aa18.6■□□□□ 0.57
CTDP1-201ENST00000075430 TMCO5BA8MYB1 307 aa18.59■□□□□ 0.57
CTDP1-201ENST00000075430 PRPF3O43395 683 aaKnown RBP18.59■□□□□ 0.57
CTDP1-201ENST00000075430 VAV2P52735 878 aa18.59■□□□□ 0.57
CTDP1-201ENST00000075430 TROAPQ12815 778 aa18.59■□□□□ 0.57
CTDP1-201ENST00000075430 UHMK1Q8TAS1 419 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms