RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Spata4Q8K3V1 295 aa17.91■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Aknad1E9Q8N6 675 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Scgb2b19J3QM75 112 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Fdx1P46656 188 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Cacnb3P54285 484 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Ccdc93Q7TQK5 629 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Ushbp1Q8R370 680 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Zcrb1Q9CZ96 217 aaKnown RBP17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Kcnj4P52189 445 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Ppp4cP97470 307 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Kctd1Q5M956 257 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Hpcal4Q8BGZ1 191 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Strip1Q8C079 837 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Afg3l2Q8JZQ2 802 aaKnown RBP17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Cacnb1Q8R3Z5 597 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Prc1Q99K43 603 aaKnown RBP17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Txnrd3Q99MD6 652 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Zfp853A0A1D5RM95 733 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Dnm2P39054 870 aaKnown RBP17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Zfp781Q0P5U5 243 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Chrna5Q2MKA5 467 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 AsnsQ61024 561 aa17.9■□□□□ 0.46
Ckap4-201ENSMUST00000053871 Cacna1sQ02789 1880 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Zfp597E9Q6S0 419 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Tcp11Q01755 566 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Psd3Q2PFD7 1037 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 DaglaQ6WQJ1 1044 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Cdan1Q8CC12 1239 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ces1Q8VCC2 565 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Dbndd2Q9CRD4 158 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ccdc105Q9D4K7 499 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Map9Q3TRR0 646 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Map3k12Q60700 888 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Fkbp3Q62446 224 aaKnown RBP17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ccdc57Q6PHN1 1016 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Znf18Q810A1 556 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Sash3Q8K352 380 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Pcdhb5Q91XZ5 792 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 St5Q924W7 1134 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Fam114a1Q9D281 569 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ccnt1Q9QWV9 724 aaKnown RBP17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Trp53inp1Q9QXE4 239 aa17.89■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Exoc3l2D3YUP5 789 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 InhbeO08717 350 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Prl2c2P04095 224 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Grm4Q68EF4 912 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ccdc172Q810N9 267 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Bicdl2Q8CHW5 507 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Heg1E9Q7X6 1337 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Vsnl1P62761 191 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Evi5P97366 809 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Cnnm4Q69ZF7 771 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Kctd10Q922M3 315 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 CutaQ9CQ89 177 aa17.88■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Etnk2A7MCT6 385 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Vmn2r68L7N2B3 851 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Eef2P58252 858 aaKnown RBP17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ankrd13cQ3UX43 541 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Znf280dQ68FE8 974 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Gpt2Q8BGT5 522 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Arl6ip4Q9JM93 229 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Klrc1Q9Z202 244 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Dnai2A2AC93 623 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 LdhaP06151 332 aaKnown RBP17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Snap25P60879 206 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Kcnb1Q03717 857 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 PRAG1Q571I4 1179 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Haus6Q6NV99 933 aaKnown RBP17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Igsf3Q6ZQA6 1194 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 LarsQ8BMJ2 1178 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 TbcbQ9D1E6 244 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ipo7Q9EPL8 1038 aaKnown RBP17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 NpcdF8VQB8 469 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Slc9a2Q3ZAS0 814 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Asic3Q6X1Y6 530 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 BC048507Q80ZS7 89 aa17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Matr3Q8K310 846 aaKnown RBP17.87■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Pcdh11xF6ZNL5 1338 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Gm7168A0AUV4 508 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Spocd1B1ASB6 936 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Abcb4P21440 1276 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Nap1l2P51860 460 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Nol4P60954 483 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Gas1Q01721 343 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Pabpc4Q6PHQ9 660 aaKnown RBP17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Clca4aQ6Q473 924 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Lzts2Q91YU6 671 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Frmpd4A2AFR3 1320 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ecm29Q6PDI5 1840 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ces1aE9PYP1 563 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Vmn2r71L7N2D8 855 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Sema6bO54951 886 aa17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Nedd4P46935 887 aaKnown RBP17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Arfgef1G3X9K3 1846 aaKnown RBP17.86■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Gfpt1P47856 697 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Gdf10P97737 476 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Acot10Q32MW3 439 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Slc2a13Q3UHK1 637 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Sec31aQ3UPL0 1230 aaKnown RBP17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Cc2d1bQ8BRN9 848 aa17.85■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms