RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 SUP35P05453 685 aaKnown RBP2.67□□□□□ -1.98
snR56snR56 YKL050CP35736 922 aa2.67□□□□□ -1.98
snR56snR56 SHO1P40073 367 aa2.67□□□□□ -1.98
snR56snR56 PUG1P40100 303 aa2.67□□□□□ -1.98
snR56snR56 ALG8P40351 577 aa2.67□□□□□ -1.98
snR56snR56 INN1P53901 409 aa2.67□□□□□ -1.98
snR56snR56 RHO4Q00246 291 aa2.67□□□□□ -1.98
snR56snR56 YPL014WQ02606 381 aa2.67□□□□□ -1.98
snR56snR56 ELP3Q02908 557 aaKnown RBP2.67□□□□□ -1.98
snR56snR56 YMR160WQ03823 816 aa2.67□□□□□ -1.98
snR56snR56 RBD2Q12270 262 aa2.67□□□□□ -1.98
snR56snR56 CAR1P00812 333 aaKnown RBP2.66□□□□□ -1.98
snR56snR56 PUT2P07275 575 aa2.66□□□□□ -1.98
snR56snR56 TY2A-LR1P0C2J4 438 aa2.66□□□□□ -1.98
snR56snR56 TY2A-FP0CX61 438 aa2.66□□□□□ -1.98
snR56snR56 TY2A-GR2P0CX62 438 aa2.66□□□□□ -1.98
snR56snR56 NCP1P16603 691 aaKnown RBP2.66□□□□□ -1.98
snR56snR56 CLB4P24871 460 aa2.66□□□□□ -1.98
snR56snR56 TY2A-CP25383 438 aa2.66□□□□□ -1.98
snR56snR56 CBF2P32504 956 aa2.66□□□□□ -1.98
snR56snR56 SNU114P36048 1008 aaKnown RBP2.66□□□□□ -1.98
snR56snR56 OSH3P38713 996 aaKnown RBP2.66□□□□□ -1.98
snR56snR56 RPS10BP46784 105 aaKnown RBP2.66□□□□□ -1.98
snR56snR56 TY2A-DR2Q03483 438 aa2.66□□□□□ -1.98
snR56snR56 SYO1Q07395 620 aa2.66□□□□□ -1.98
snR56snR56 TY2A-BQ12260 438 aa2.66□□□□□ -1.98
snR56snR56 INP53Q12271 1107 aa2.66□□□□□ -1.98
snR56snR56 TY2A-OR2Q12293 438 aa2.66□□□□□ -1.98
snR56snR56 TY2A-DR1Q12392 438 aa2.66□□□□□ -1.98
snR56snR56 TY2A-OR1Q12439 438 aa2.66□□□□□ -1.98
snR56snR56 CTF3Q12748 733 aa2.66□□□□□ -1.98
snR56snR56 TY2A-DR3Q99303 438 aa2.66□□□□□ -1.98
snR56snR56 APE1P14904 514 aa2.65□□□□□ -1.99
snR56snR56 SNG1P46950 547 aa2.65□□□□□ -1.99
snR56snR56 YNR061CP53747 219 aa2.65□□□□□ -1.99
snR56snR56 GLO2Q05584 274 aa2.65□□□□□ -1.99
snR56snR56 YDL009CQ12210 107 aa2.65□□□□□ -1.99
snR56snR56 SGV1P23293 657 aaKnown RBP2.64□□□□□ -1.99
snR56snR56 HIM1Q06674 414 aa2.64□□□□□ -1.99
snR56snR56 RPS10AQ08745 105 aaPredicted RBP2.64□□□□□ -1.99
snR56snR56 CDC15P27636 974 aa2.63□□□□□ -1.99
snR56snR56 COG1P53079 417 aa2.63□□□□□ -1.99
snR56snR56 FOL1P53848 824 aa2.63□□□□□ -1.99
snR56snR56 ARK1P53974 638 aa2.63□□□□□ -1.99
snR56snR56 EMI2Q04409 500 aaKnown RBP2.63□□□□□ -1.99
snR56snR56 PBA1Q05778 276 aa2.63□□□□□ -1.99
snR56snR56 BNA5Q05979 453 aa2.63□□□□□ -1.99
snR56snR56 NKP1Q12493 238 aa2.63□□□□□ -1.99
snR56snR56 ADH2P00331 348 aaKnown RBP2.62□□□□□ -1.99
snR56snR56 HHF1P02309 103 aaKnown RBP2.62□□□□□ -1.99
snR56snR56 LPD1P09624 499 aaKnown RBP2.62□□□□□ -1.99
snR56snR56 UIP3P39547 235 aa2.62□□□□□ -1.99
snR56snR56 HAT2P39984 401 aa2.62□□□□□ -1.99
snR56snR56 COX17Q12287 69 aa2.62□□□□□ -1.99
snR56snR56 ARG81P05085 880 aa2.61□□□□□ -1.99
snR56snR56 MSS18P08593 268 aa2.61□□□□□ -1.99
snR56snR56 SPE2P21182 396 aa2.61□□□□□ -1.99
snR56snR56 ARO2P28777 376 aaKnown RBP2.61□□□□□ -1.99
snR56snR56 YIL067CP40514 678 aa2.61□□□□□ -1.99
snR56snR56 RRN11Q04712 507 aa2.61□□□□□ -1.99
snR56snR56 MRPL35Q06678 367 aa2.61□□□□□ -1.99
snR56snR56 PCD1Q12524 340 aa2.61□□□□□ -1.99
snR56snR56 CPR1P14832 162 aaKnown RBP2.6□□□□□ -1.99
snR56snR56 TSC10P38342 320 aa2.6□□□□□ -1.99
snR56snR56 PFK26P40433 827 aaKnown RBP2.6□□□□□ -1.99
snR56snR56 FAF1P40546 346 aaPredicted RBP2.6□□□□□ -1.99
snR56snR56 SGM1P47166 707 aa2.6□□□□□ -1.99
snR56snR56 TSA2Q04120 196 aa2.6□□□□□ -1.99
snR56snR56 YOR019WQ99248 730 aa2.6□□□□□ -1.99
snR56snR56 MPD2Q99316 277 aa2.6□□□□□ -1.99
snR56snR56 VCX1Q99385 411 aa2.6□□□□□ -1.99
snR56snR56 DBP8P38719 431 aa2.59□□□□□ -1.99
snR56snR56 REE1P40893 198 aa2.59□□□□□ -1.99
snR56snR56 SMM1P53720 384 aaKnown RBP2.59□□□□□ -1.99
snR56snR56 DOS2P54858 310 aa2.59□□□□□ -1.99
snR56snR56 CIA1Q05583 330 aa2.59□□□□□ -1.99
snR56snR56 ERG27Q12452 347 aaKnown RBP2.59□□□□□ -1.99
snR56snR56 MRP4P32902 394 aa2.58□□□□□ -2
snR56snR56 UTH1P36135 365 aa2.58□□□□□ -2
snR56snR56 NPR3P38742 1146 aa2.58□□□□□ -2
snR56snR56 FMP10P40098 244 aa2.58□□□□□ -2
snR56snR56 IGO1P53897 168 aa2.58□□□□□ -2
snR56snR56 MRPL51Q06090 140 aaPredicted RBP2.58□□□□□ -2
snR56snR56 MLC2Q06580 163 aa2.58□□□□□ -2
snR56snR56 MTR2P34232 184 aaKnown RBP2.57□□□□□ -2
snR56snR56 MRP21P38175 177 aa2.57□□□□□ -2
snR56snR56 DIA4P38705 446 aaPredicted RBP2.57□□□□□ -2
snR56snR56 SCD6P45978 349 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
snR56snR56 ERG26P53199 349 aaKnown RBP2.57□□□□□ -2
snR56snR56 SHY1P53266 389 aa2.57□□□□□ -2
snR56snR56 SDH5Q08230 162 aa2.57□□□□□ -2
snR56snR56 RVS161P25343 265 aaKnown RBP2.56□□□□□ -2
snR56snR56 YKL133CP36066 463 aa2.56□□□□□ -2
snR56snR56 SEC24P40482 926 aaKnown RBP2.56□□□□□ -2
snR56snR56 RSM23Q01163 450 aa2.56□□□□□ -2
snR56snR56 YMR027WQ04371 470 aa2.56□□□□□ -2
snR56snR56 TPK1P06244 397 aa2.55□□□□□ -2
snR56snR56 CDC60P26637 1090 aaKnown RBP2.55□□□□□ -2
snR56snR56 FRE1P32791 686 aa2.55□□□□□ -2
snR56snR56 VPS27P40343 622 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms