RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C ECM10P39987 644 aa3.49□□□□□ -1.85
ATG27YJL178C KAP123P40069 1113 aaKnown RBP3.49□□□□□ -1.85
ATG27YJL178C SEC24P40482 926 aaKnown RBP3.49□□□□□ -1.85
ATG27YJL178C BUD27P43573 796 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
ATG27YJL178C YFR020WP43600 232 aa3.49□□□□□ -1.85
ATG27YJL178C CBK1P53894 756 aa3.49□□□□□ -1.85
ATG27YJL178C ASI1P54074 624 aa3.49□□□□□ -1.85
ATG27YJL178C ALE1Q08548 619 aa3.49□□□□□ -1.85
ATG27YJL178C EDE1P34216 1381 aa3.49□□□□□ -1.85
ATG27YJL178C RPB2P08518 1224 aaKnown RBP3.48□□□□□ -1.85
ATG27YJL178C YFL068WP0CX99 160 aa3.48□□□□□ -1.85
ATG27YJL178C YLL066W-AP0CY00 160 aa3.48□□□□□ -1.85
ATG27YJL178C YLL067W-AP0CY01 160 aa3.48□□□□□ -1.85
ATG27YJL178C TKL1P23254 680 aaKnown RBP3.48□□□□□ -1.85
ATG27YJL178C STE50P25344 346 aa3.48□□□□□ -1.85
ATG27YJL178C ALY1P36117 915 aa3.48□□□□□ -1.85
ATG27YJL178C YNG2P38806 282 aaKnown RBP3.48□□□□□ -1.85
ATG27YJL178C DPH1P40487 425 aaKnown RBP3.48□□□□□ -1.85
ATG27YJL178C IME4P41833 600 aa3.48□□□□□ -1.85
ATG27YJL178C CTK2P46962 323 aa3.48□□□□□ -1.85
ATG27YJL178C NUS1Q12063 375 aa3.48□□□□□ -1.85
ATG27YJL178C RPS19AP07280 144 aaKnown RBP3.47□□□□□ -1.85
ATG27YJL178C RPS19BP07281 144 aaPredicted RBP3.47□□□□□ -1.85
ATG27YJL178C OSM1P21375 501 aaKnown RBP3.47□□□□□ -1.85
ATG27YJL178C YCR043CP25361 127 aa3.47□□□□□ -1.85
ATG27YJL178C MNN2P38069 597 aa3.47□□□□□ -1.85
ATG27YJL178C KTR3P38130 404 aaPredicted RBP3.47□□□□□ -1.85
ATG27YJL178C YIR014WP40570 242 aa3.47□□□□□ -1.85
ATG27YJL178C TES1P41903 349 aaKnown RBP3.47□□□□□ -1.85
ATG27YJL178C PIL1P53252 339 aaKnown RBP3.47□□□□□ -1.85
ATG27YJL178C MEP3P53390 489 aa3.47□□□□□ -1.85
ATG27YJL178C YTP1P53584 459 aa3.47□□□□□ -1.85
ATG27YJL178C RCO1Q04779 684 aa3.47□□□□□ -1.85
ATG27YJL178C ARP9Q05123 467 aa3.47□□□□□ -1.85
ATG27YJL178C YMR034CQ05131 434 aaPredicted RBP3.47□□□□□ -1.85
ATG27YJL178C NKP2Q06162 153 aa3.47□□□□□ -1.85
ATG27YJL178C VIP1Q06685 1146 aaKnown RBP3.47□□□□□ -1.85
ATG27YJL178C GRS2Q06817 618 aa3.47□□□□□ -1.85
ATG27YJL178C RIM15P43565 1770 aa3.47□□□□□ -1.85
ATG27YJL178C DUR1,2P32528 1835 aaKnown RBP3.47□□□□□ -1.85
ATG27YJL178C YBR085C-AO43137 85 aa3.46□□□□□ -1.86
ATG27YJL178C MRP7P12687 371 aa3.46□□□□□ -1.86
ATG27YJL178C CDC15P27636 974 aa3.46□□□□□ -1.86
ATG27YJL178C MCM10P32354 571 aa3.46□□□□□ -1.86
ATG27YJL178C CBF2P32504 956 aa3.46□□□□□ -1.86
ATG27YJL178C RKM3P38222 552 aa3.46□□□□□ -1.86
ATG27YJL178C MET30P39014 640 aa3.46□□□□□ -1.86
ATG27YJL178C YJR061WP40355 935 aa3.46□□□□□ -1.86
ATG27YJL178C YIL169CP40442 995 aa3.46□□□□□ -1.86
ATG27YJL178C YNL181WP53878 407 aa3.46□□□□□ -1.86
ATG27YJL178C INN1P53901 409 aa3.46□□□□□ -1.86
ATG27YJL178C MUB1Q03162 620 aa3.46□□□□□ -1.86
ATG27YJL178C IZH1Q03419 316 aa3.46□□□□□ -1.86
ATG27YJL178C UTP21Q06078 939 aaPredicted RBP3.46□□□□□ -1.86
ATG27YJL178C MCP2Q06567 569 aa3.46□□□□□ -1.86
ATG27YJL178C ENT4Q07872 247 aa3.46□□□□□ -1.86
ATG27YJL178C SWI1P09547 1314 aa3.45□□□□□ -1.86
ATG27YJL178C RAP1P11938 827 aa3.45□□□□□ -1.86
ATG27YJL178C RER1P25560 188 aa3.45□□□□□ -1.86
ATG27YJL178C SSH4P32343 579 aa3.45□□□□□ -1.86
ATG27YJL178C SAC1P32368 623 aaKnown RBP3.45□□□□□ -1.86
ATG27YJL178C NUP133P36161 1157 aa3.45□□□□□ -1.86
ATG27YJL178C RFC1P38630 861 aaKnown RBP3.45□□□□□ -1.86
ATG27YJL178C YAT2P40017 923 aa3.45□□□□□ -1.86
ATG27YJL178C SLZ1P40167 298 aa3.45□□□□□ -1.86
ATG27YJL178C DOT5P40553 215 aa3.45□□□□□ -1.86
ATG27YJL178C HXT9P40885 567 aa3.45□□□□□ -1.86
ATG27YJL178C SIP4P46954 829 aa3.45□□□□□ -1.86
ATG27YJL178C BET4Q00618 327 aa3.45□□□□□ -1.86
ATG27YJL178C ARP10Q04549 284 aa3.45□□□□□ -1.86
ATG27YJL178C ATG9Q12142 997 aa3.45□□□□□ -1.86
ATG27YJL178C LYS2P07702 1392 aa3.45□□□□□ -1.86
ATG27YJL178C UTP10P42945 1769 aaKnown RBP3.45□□□□□ -1.86
ATG27YJL178C FUM1P08417 488 aaKnown RBP3.44□□□□□ -1.86
ATG27YJL178C LPD1P09624 499 aaKnown RBP3.44□□□□□ -1.86
ATG27YJL178C KRS1P15180 591 aaKnown RBP3.44□□□□□ -1.86
ATG27YJL178C CLB2P24869 491 aa3.44□□□□□ -1.86
ATG27YJL178C DPB3P27344 201 aa3.44□□□□□ -1.86
ATG27YJL178C GCS1P35197 352 aa3.44□□□□□ -1.86
ATG27YJL178C LEU5P38702 357 aa3.44□□□□□ -1.86
ATG27YJL178C BUR6P40096 142 aa3.44□□□□□ -1.86
ATG27YJL178C VRG4P40107 337 aa3.44□□□□□ -1.86
ATG27YJL178C VID27P40157 782 aa3.44□□□□□ -1.86
ATG27YJL178C SGF73P53165 657 aa3.44□□□□□ -1.86
ATG27YJL178C NNF2P53253 936 aa3.44□□□□□ -1.86
ATG27YJL178C IST1P53843 298 aaPredicted RBP3.44□□□□□ -1.86
ATG27YJL178C HXK2P04807 486 aaKnown RBP3.43□□□□□ -1.86
ATG27YJL178C CBP1P07252 654 aa3.43□□□□□ -1.86
ATG27YJL178C MUD2P36084 527 aaKnown RBP3.43□□□□□ -1.86
ATG27YJL178C RTT107P38850 1070 aa3.43□□□□□ -1.86
ATG27YJL178C LYS14P40971 790 aa3.43□□□□□ -1.86
ATG27YJL178C RPS7BP48164 190 aaKnown RBP3.43□□□□□ -1.86
ATG27YJL178C ESBP6P53918 673 aa3.43□□□□□ -1.86
ATG27YJL178C SVL3Q03088 825 aaKnown RBP3.43□□□□□ -1.86
ATG27YJL178C YMR018WQ04364 514 aa3.43□□□□□ -1.86
ATG27YJL178C SKG3Q06315 1026 aa3.43□□□□□ -1.86
ATG27YJL178C IMH1Q06704 911 aaKnown RBP3.43□□□□□ -1.86
ATG27YJL178C RIX7Q07844 837 aaKnown RBP3.43□□□□□ -1.86
ATG27YJL178C RAD50P12753 1312 aa3.43□□□□□ -1.86
ATG27YJL178C CDC16P09798 840 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms