RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C MET8P15807 274 aa3.51□□□□□ -1.85
VPS53YJL029C VPS34P22543 875 aa3.51□□□□□ -1.85
VPS53YJL029C AMD2P22580 549 aa3.51□□□□□ -1.85
VPS53YJL029C TPS2P31688 896 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C YME1P32795 747 aa3.51□□□□□ -1.85
VPS53YJL029C SET3P36124 751 aa3.51□□□□□ -1.85
VPS53YJL029C GIC1P38785 314 aa3.51□□□□□ -1.85
VPS53YJL029C GIM4P40005 111 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C DUG1P43616 481 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C YJR039WP47107 1121 aa3.51□□□□□ -1.85
VPS53YJL029C RNH70P53331 553 aa3.51□□□□□ -1.85
VPS53YJL029C VAC7P53950 1165 aa3.51□□□□□ -1.85
VPS53YJL029C KTR5P53966 522 aaPredicted RBP3.51□□□□□ -1.85
VPS53YJL029C ARP4P80428 489 aa3.51□□□□□ -1.85
VPS53YJL029C REG1Q00816 1014 aa3.51□□□□□ -1.85
VPS53YJL029C UBP2Q01476 1272 aa3.51□□□□□ -1.85
VPS53YJL029C SHR3Q02774 210 aa3.51□□□□□ -1.85
VPS53YJL029C SLU7Q02775 382 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C ARX1Q03862 593 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C RCO1Q04779 684 aa3.51□□□□□ -1.85
VPS53YJL029C SYT1Q06836 1226 aa3.51□□□□□ -1.85
VPS53YJL029C TRM8Q12009 286 aa3.51□□□□□ -1.85
VPS53YJL029C LEU9Q12166 604 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C RKM5Q12367 367 aa3.51□□□□□ -1.85
VPS53YJL029C CDC8P00572 216 aa3.51□□□□□ -1.85
VPS53YJL029C HEM15P16622 393 aa3.51□□□□□ -1.85
VPS53YJL029C FUR1P18562 216 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C PRP9P19736 530 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C MGT1P26188 188 aa3.51□□□□□ -1.85
VPS53YJL029C CDC13P32797 924 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C MFT1P33441 392 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C SKT5P34226 696 aa3.51□□□□□ -1.85
VPS53YJL029C TAF14P35189 244 aa3.51□□□□□ -1.85
VPS53YJL029C THI80P35202 319 aa3.51□□□□□ -1.85
VPS53YJL029C NTR2P36118 322 aaPredicted RBP3.51□□□□□ -1.85
VPS53YJL029C ARA1P38115 344 aa3.51□□□□□ -1.85
VPS53YJL029C YHR033WP38690 423 aa3.51□□□□□ -1.85
VPS53YJL029C YHR020WP38708 688 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C CIS3P47001 227 aa3.51□□□□□ -1.85
VPS53YJL029C MPS2P53159 387 aa3.51□□□□□ -1.85
VPS53YJL029C YGR012WP53206 393 aa3.51□□□□□ -1.85
VPS53YJL029C RPN9Q04062 393 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C DIC1Q06143 298 aa3.51□□□□□ -1.85
VPS53YJL029C YLR030WQ07967 263 aa3.51□□□□□ -1.85
VPS53YJL029C SEC39Q12745 709 aa3.51□□□□□ -1.85
VPS53YJL029C YIL046W-AQ3E7Z4 54 aa3.51□□□□□ -1.85
VPS53YJL029C BRR1Q99177 341 aaPredicted RBP3.51□□□□□ -1.85
VPS53YJL029C LAT1P12695 482 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C STE4P18851 423 aa3.5□□□□□ -1.85
VPS53YJL029C DAL82P21705 255 aa3.5□□□□□ -1.85
VPS53YJL029C CDC20P26309 610 aa3.5□□□□□ -1.85
VPS53YJL029C CWP1P28319 239 aa3.5□□□□□ -1.85
VPS53YJL029C HOG1P32485 435 aa3.5□□□□□ -1.85
VPS53YJL029C BRR2P32639 2163 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C YKL100CP34248 587 aa3.5□□□□□ -1.85
VPS53YJL029C REI1P38344 393 aaPredicted RBP3.5□□□□□ -1.85
VPS53YJL029C REV7P38927 245 aa3.5□□□□□ -1.85
VPS53YJL029C CCT2P39076 527 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C SPF1P39986 1215 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C ALR2P43553 858 aa3.5□□□□□ -1.85
VPS53YJL029C NMD5P46970 1048 aa3.5□□□□□ -1.85
VPS53YJL029C FRE4P53746 719 aa3.5□□□□□ -1.85
VPS53YJL029C ISU1Q03020 165 aa3.5□□□□□ -1.85
VPS53YJL029C TRM12Q04235 462 aa3.5□□□□□ -1.85
VPS53YJL029C BCH1Q05029 724 aa3.5□□□□□ -1.85
VPS53YJL029C GCY1P14065 312 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
VPS53YJL029C PRP2P20095 876 aaPredicted RBP3.5□□□□□ -1.85
VPS53YJL029C CLB1P24868 471 aa3.5□□□□□ -1.85
VPS53YJL029C HRR25P29295 494 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C MRPL9P31334 269 aa3.5□□□□□ -1.85
VPS53YJL029C LRG1P35688 1017 aa3.5□□□□□ -1.85
VPS53YJL029C PBP2P38151 413 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
VPS53YJL029C DED81P38707 554 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C UBA4P38820 440 aa3.5□□□□□ -1.85
VPS53YJL029C RPS26AP39938 119 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C RPS26BP39939 119 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C YER034WP40022 185 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C CCT8P47079 568 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C OSH6Q02201 448 aa3.5□□□□□ -1.85
VPS53YJL029C NHP10Q03435 203 aa3.5□□□□□ -1.85
VPS53YJL029C NUS1Q12063 375 aa3.5□□□□□ -1.85
VPS53YJL029C DIN7Q12086 430 aa3.5□□□□□ -1.85
VPS53YJL029C SUL2Q12325 893 aa3.5□□□□□ -1.85
VPS53YJL029C YDR262WQ12331 272 aa3.5□□□□□ -1.85
VPS53YJL029C RRP12Q12754 1228 aaKnown RBP3.5□□□□□ -1.85
VPS53YJL029C YAR066WP0CX18 203 aa3.49□□□□□ -1.85
VPS53YJL029C YHR214WP0CX19 203 aa3.49□□□□□ -1.85
VPS53YJL029C CBF1P17106 351 aa3.49□□□□□ -1.85
VPS53YJL029C MRPL25P23369 157 aa3.49□□□□□ -1.85
VPS53YJL029C GDA1P32621 518 aa3.49□□□□□ -1.85
VPS53YJL029C TRM7P38238 310 aaKnown RBP3.49□□□□□ -1.85
VPS53YJL029C SPP381P38282 291 aaPredicted RBP3.49□□□□□ -1.85
VPS53YJL029C RIM11P38615 370 aa3.49□□□□□ -1.85
VPS53YJL029C YHI9P38765 294 aa3.49□□□□□ -1.85
VPS53YJL029C MEF2P39677 819 aa3.49□□□□□ -1.85
VPS53YJL029C ZIM17P42844 174 aa3.49□□□□□ -1.85
VPS53YJL029C ADE13Q05911 482 aaKnown RBP3.49□□□□□ -1.85
VPS53YJL029C RRP42Q12277 265 aaPredicted RBP3.49□□□□□ -1.85
VPS53YJL029C LAG2Q92325 660 aa3.49□□□□□ -1.85
VPS53YJL029C RAD1P06777 1100 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms