RNA–Protein interactions for RNA: YGL133W

ITC1, Transcript of Subunit of ATP-dependent Isw2p-Itc1p chromatin remodeling complex, yeast

Gene ITC1, Length 3,795 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ITC1	YGL133W	NDT80	P38830	627 aa		3.01	□□□□□ -1.93
ITC1	YGL133W	CPR7	P47103	393 aa		3.01	□□□□□ -1.93
ITC1	YGL133W	MFB1	Q04922	465 aa		3.01	□□□□□ -1.93
ITC1	YGL133W	YLR177W	Q06251	628 aa		3.01	□□□□□ -1.93
ITC1	YGL133W	PDH1	Q12428	516 aa	Known RBP	3.01	□□□□□ -1.93
ITC1	YGL133W	CBP1	P07252	654 aa		3	□□□□□ -1.93
ITC1	YGL133W	YML002W	P0CF17	737 aa		3	□□□□□ -1.93
ITC1	YGL133W	SSC1	P0CS90	654 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	CDC24	P11433	854 aa	Predicted RBP	3	□□□□□ -1.93
ITC1	YGL133W	CBF1	P17106	351 aa		3	□□□□□ -1.93
ITC1	YGL133W	URA7	P28274	579 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	SKG6	P32900	734 aa	Predicted RBP	3	□□□□□ -1.93
ITC1	YGL133W	SLC1	P33333	303 aa		3	□□□□□ -1.93
ITC1	YGL133W	KES1	P35844	434 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	YHB1	P39676	399 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	EAF5	P39995	279 aa		3	□□□□□ -1.93
ITC1	YGL133W	GID8	P40208	455 aa		3	□□□□□ -1.93
ITC1	YGL133W	PDS1	P40316	373 aa	Predicted RBP	3	□□□□□ -1.93
ITC1	YGL133W	UBP7	P40453	1071 aa		3	□□□□□ -1.93
ITC1	YGL133W	NOP9	P47077	666 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	SDH1	Q00711	640 aa		3	□□□□□ -1.93
ITC1	YGL133W	KIN4	Q01919	800 aa		3	□□□□□ -1.93
ITC1	YGL133W	TOF2	Q02208	771 aa		3	□□□□□ -1.93
ITC1	YGL133W	YML037C	Q03703	340 aa		3	□□□□□ -1.93
ITC1	YGL133W	YLR455W	Q06188	304 aa		3	□□□□□ -1.93
ITC1	YGL133W	CDA1	Q06702	301 aa		3	□□□□□ -1.93
ITC1	YGL133W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
ITC1	YGL133W	YOR019W	Q99248	730 aa		3	□□□□□ -1.93
ITC1	YGL133W	SEC63	P14906	663 aa		3	□□□□□ -1.93
ITC1	YGL133W	PRP22	P24384	1145 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	STE50	P25344	346 aa		3	□□□□□ -1.93
ITC1	YGL133W	SPS22	P25380	463 aa		3	□□□□□ -1.93
ITC1	YGL133W	TRM2	P33753	639 aa		3	□□□□□ -1.93
ITC1	YGL133W	RFC3	P38629	340 aa		3	□□□□□ -1.93
ITC1	YGL133W	MMS21	P38632	267 aa		3	□□□□□ -1.93
ITC1	YGL133W	SSZ1	P38788	538 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	TRM5	P38793	499 aa		3	□□□□□ -1.93
ITC1	YGL133W	NAS2	P40555	220 aa		3	□□□□□ -1.93
ITC1	YGL133W	MET12	P46151	657 aa		3	□□□□□ -1.93
ITC1	YGL133W	SAP4	P53036	818 aa		3	□□□□□ -1.93
ITC1	YGL133W	TEL2	P53038	688 aa		3	□□□□□ -1.93
ITC1	YGL133W	MRM2	P53123	320 aa		3	□□□□□ -1.93
ITC1	YGL133W	ARP4	P80428	489 aa		3	□□□□□ -1.93
ITC1	YGL133W	YKR011C	Q02209	353 aa		3	□□□□□ -1.93
ITC1	YGL133W	YDR222W	Q04925	415 aa		3	□□□□□ -1.93
ITC1	YGL133W	ABP140	Q08641	628 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	RPS3	P05750	240 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	GPA2	P10823	449 aa		3	□□□□□ -1.93
ITC1	YGL133W	DBP3	P20447	523 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	HMX1	P32339	317 aa		3	□□□□□ -1.93
ITC1	YGL133W	YBR225W	P38321	900 aa		3	□□□□□ -1.93
ITC1	YGL133W	MSR1	P38714	643 aa		3	□□□□□ -1.93
ITC1	YGL133W	ERC1	P38767	581 aa		3	□□□□□ -1.93
ITC1	YGL133W	LAM1	P38851	1228 aa		3	□□□□□ -1.93
ITC1	YGL133W	VAB2	P40003	282 aa		3	□□□□□ -1.93
ITC1	YGL133W	SCC4	P40090	624 aa		3	□□□□□ -1.93
ITC1	YGL133W	CUL3	P53202	744 aa		3	□□□□□ -1.93
ITC1	YGL133W	RTT102	P53330	157 aa		3	□□□□□ -1.93
ITC1	YGL133W	EOS1	P53938	366 aa		3	□□□□□ -1.93
ITC1	YGL133W	GPD1	Q00055	391 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	YDR476C	Q03362	224 aa		3	□□□□□ -1.93
ITC1	YGL133W	SHS1	Q07657	551 aa		3	□□□□□ -1.93
ITC1	YGL133W	RTC5	Q12108	567 aa	Known RBP	3	□□□□□ -1.93
ITC1	YGL133W	YDR018C	Q12185	396 aa		3	□□□□□ -1.93
ITC1	YGL133W	SKS1	Q12505	502 aa		3	□□□□□ -1.93
ITC1	YGL133W	MET17	P06106	444 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	SAM1	P10659	382 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	MSB1	P21339	1137 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	CLB3	P24870	427 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	CYS3	P31373	394 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	DGR2	P32330	852 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	HIR2	P32480	875 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	YPT7	P32939	208 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	RMA1	P36001	430 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	DUG2	P38149	878 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	SIF2	P38262	535 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	SHC1	P39000	512 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	SSP120	P39931	234 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	SMK1	P41808	388 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	AVT1	P47082	602 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	SLD3	P53135	668 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	TAM41	P53230	385 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	ARE2	P53629	642 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	BIO4	P53630	237 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	ARK1	P53974	638 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	PRO2	P54885	456 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	ACL4	Q03771	387 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	PPM1	Q04081	328 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	THI7	Q05998	598 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	CRN1	Q06440	651 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	RRT8	Q08219	342 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	SVS1	Q12254	260 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	SPE4	Q12455	300 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	AVL9	Q12500	764 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	YLR149C	Q99296	730 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	ENA1	P13587	1091 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	HPR1	P17629	752 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	SEC1	P30619	724 aa	Known RBP	2.99	□□□□□ -1.93
ITC1	YGL133W	VPH2	P32341	215 aa		2.99	□□□□□ -1.93
ITC1	YGL133W	SUR1	P33300	382 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 95 ms