RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C CSL4P53859 292 aaPredicted RBP2.27□□□□□ -2.05
RTR1YER139C INN1P53901 409 aa2.27□□□□□ -2.05
RTR1YER139C ELP3Q02908 557 aaKnown RBP2.27□□□□□ -2.05
RTR1YER139C YMR160WQ03823 816 aa2.27□□□□□ -2.05
RTR1YER139C TMA16Q08687 178 aa2.27□□□□□ -2.05
RTR1YER139C SST2P11972 698 aaKnown RBP2.26□□□□□ -2.05
RTR1YER139C SHO1P40073 367 aa2.26□□□□□ -2.05
RTR1YER139C ALG8P40351 577 aa2.26□□□□□ -2.05
RTR1YER139C RPS10BP46784 105 aaKnown RBP2.26□□□□□ -2.05
RTR1YER139C PYK2P52489 506 aaKnown RBP2.26□□□□□ -2.05
RTR1YER139C ZDS2P54786 942 aa2.26□□□□□ -2.05
RTR1YER139C TY2A-LR1P0C2J4 438 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-FP0CX61 438 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-GR2P0CX62 438 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-CP25383 438 aa2.25□□□□□ -2.05
RTR1YER139C YKL050CP35736 922 aa2.25□□□□□ -2.05
RTR1YER139C PUG1P40100 303 aa2.25□□□□□ -2.05
RTR1YER139C SNG1P46950 547 aa2.25□□□□□ -2.05
RTR1YER139C FOL1P53848 824 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-DR2Q03483 438 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-BQ12260 438 aa2.25□□□□□ -2.05
RTR1YER139C INP53Q12271 1107 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-OR2Q12293 438 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-DR1Q12392 438 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-OR1Q12439 438 aa2.25□□□□□ -2.05
RTR1YER139C TY2A-DR3Q99303 438 aa2.25□□□□□ -2.05
RTR1YER139C PUT2P07275 575 aa2.24□□□□□ -2.05
RTR1YER139C SSB1P11484 613 aaKnown RBP2.24□□□□□ -2.05
RTR1YER139C APE1P14904 514 aa2.24□□□□□ -2.05
RTR1YER139C SGV1P23293 657 aaKnown RBP2.24□□□□□ -2.05
RTR1YER139C CLB4P24871 460 aa2.24□□□□□ -2.05
RTR1YER139C OSH3P38713 996 aaKnown RBP2.24□□□□□ -2.05
RTR1YER139C SSB2P40150 613 aaKnown RBP2.24□□□□□ -2.05
RTR1YER139C YIL067CP40514 678 aa2.24□□□□□ -2.05
RTR1YER139C RHO4Q00246 291 aa2.24□□□□□ -2.05
RTR1YER139C GLO2Q05584 274 aa2.24□□□□□ -2.05
RTR1YER139C PBA1Q05778 276 aa2.24□□□□□ -2.05
RTR1YER139C HIM1Q06674 414 aa2.24□□□□□ -2.05
RTR1YER139C YDL009CQ12210 107 aa2.24□□□□□ -2.05
RTR1YER139C CTF3Q12748 733 aa2.24□□□□□ -2.05
RTR1YER139C HHF1P02309 103 aaKnown RBP2.23□□□□□ -2.05
RTR1YER139C SUP35P05453 685 aaKnown RBP2.23□□□□□ -2.05
RTR1YER139C CPR1P14832 162 aaKnown RBP2.23□□□□□ -2.05
RTR1YER139C SNU114P36048 1008 aaKnown RBP2.23□□□□□ -2.05
RTR1YER139C COG1P53079 417 aa2.23□□□□□ -2.05
RTR1YER139C ARK1P53974 638 aa2.23□□□□□ -2.05
RTR1YER139C TGL2P54857 326 aa2.23□□□□□ -2.05
RTR1YER139C EMI2Q04409 500 aaKnown RBP2.23□□□□□ -2.05
RTR1YER139C MRPL35Q06678 367 aa2.23□□□□□ -2.05
RTR1YER139C SYO1Q07395 620 aa2.23□□□□□ -2.05
RTR1YER139C RPS10AQ08745 105 aaPredicted RBP2.23□□□□□ -2.05
RTR1YER139C ADH2P00331 348 aaKnown RBP2.22□□□□□ -2.05
RTR1YER139C NCP1P16603 691 aaKnown RBP2.22□□□□□ -2.05
RTR1YER139C COX17Q12287 69 aa2.22□□□□□ -2.05
RTR1YER139C ARG81P05085 880 aa2.21□□□□□ -2.06
RTR1YER139C SPE2P21182 396 aa2.21□□□□□ -2.06
RTR1YER139C CDC15P27636 974 aa2.21□□□□□ -2.06
RTR1YER139C UTH1P36135 365 aa2.21□□□□□ -2.06
RTR1YER139C PFK26P40433 827 aaKnown RBP2.21□□□□□ -2.06
RTR1YER139C SMM1P53720 384 aaKnown RBP2.21□□□□□ -2.06
RTR1YER139C YNR061CP53747 219 aa2.21□□□□□ -2.06
RTR1YER139C IGO1P53897 168 aa2.21□□□□□ -2.06
RTR1YER139C ARO2P28777 376 aaKnown RBP2.2□□□□□ -2.06
RTR1YER139C TOM20P35180 183 aa2.2□□□□□ -2.06
RTR1YER139C UIP3P39547 235 aa2.2□□□□□ -2.06
RTR1YER139C HAT2P39984 401 aa2.2□□□□□ -2.06
RTR1YER139C TSA2Q04120 196 aa2.2□□□□□ -2.06
RTR1YER139C PCD1Q12524 340 aa2.2□□□□□ -2.06
RTR1YER139C YOR019WQ99248 730 aa2.2□□□□□ -2.06
RTR1YER139C VCX1Q99385 411 aa2.2□□□□□ -2.06
RTR1YER139C LPD1P09624 499 aaKnown RBP2.19□□□□□ -2.06
RTR1YER139C TSC10P38342 320 aa2.19□□□□□ -2.06
RTR1YER139C DBP8P38719 431 aa2.19□□□□□ -2.06
RTR1YER139C SHY1P53266 389 aa2.19□□□□□ -2.06
RTR1YER139C CIA1Q05583 330 aa2.19□□□□□ -2.06
RTR1YER139C BNA5Q05979 453 aa2.19□□□□□ -2.06
RTR1YER139C MPD2Q99316 277 aa2.19□□□□□ -2.06
RTR1YER139C RVS161P25343 265 aaKnown RBP2.18□□□□□ -2.06
RTR1YER139C FRE1P32791 686 aa2.18□□□□□ -2.06
RTR1YER139C MRP4P32902 394 aa2.18□□□□□ -2.06
RTR1YER139C GRX7P38068 203 aa2.18□□□□□ -2.06
RTR1YER139C MRP21P38175 177 aa2.18□□□□□ -2.06
RTR1YER139C FAF1P40546 346 aaPredicted RBP2.18□□□□□ -2.06
RTR1YER139C REE1P40893 198 aa2.18□□□□□ -2.06
RTR1YER139C RRN11Q04712 507 aa2.18□□□□□ -2.06
RTR1YER139C MRPL51Q06090 140 aaPredicted RBP2.18□□□□□ -2.06
RTR1YER139C ERG27Q12452 347 aaKnown RBP2.18□□□□□ -2.06
RTR1YER139C MSS18P08593 268 aa2.17□□□□□ -2.06
RTR1YER139C PCL1P24867 279 aa2.17□□□□□ -2.06
RTR1YER139C CDC60P26637 1090 aaKnown RBP2.17□□□□□ -2.06
RTR1YER139C FMP10P40098 244 aa2.17□□□□□ -2.06
RTR1YER139C SEC24P40482 926 aaKnown RBP2.17□□□□□ -2.06
RTR1YER139C SCD6P45978 349 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
RTR1YER139C SGM1P47166 707 aa2.17□□□□□ -2.06
RTR1YER139C RSM23Q01163 450 aa2.17□□□□□ -2.06
RTR1YER139C NKP1Q12493 238 aa2.17□□□□□ -2.06
RTR1YER139C TMA7Q3E764 64 aaKnown RBP2.17□□□□□ -2.06
RTR1YER139C TPK1P06244 397 aa2.16□□□□□ -2.06
RTR1YER139C PEX8P53248 589 aa2.16□□□□□ -2.06
RTR1YER139C HAL1Q01766 294 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 132.3 ms