RNA–Protein interactions for RNA: YER089C

PTC2, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC2, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC2	YER089C	CLB4	P24871	460 aa		13.19	□□□□□ -0.3
PTC2	YER089C	TIP20	P33891	701 aa		13.19	□□□□□ -0.3
PTC2	YER089C	PDX3	P38075	228 aa	Known RBP	13.19	□□□□□ -0.3
PTC2	YER089C	PPX1	P38698	397 aa		13.19	□□□□□ -0.3
PTC2	YER089C	TIS11	P47977	285 aa		13.19	□□□□□ -0.3
PTC2	YER089C	NAS6	P50086	228 aa		13.19	□□□□□ -0.3
PTC2	YER089C	VAC7	P53950	1165 aa		13.19	□□□□□ -0.3
PTC2	YER089C	YOR012W	Q12351	137 aa		13.19	□□□□□ -0.3
PTC2	YER089C	TPK2	P06245	380 aa		13.18	□□□□□ -0.3
PTC2	YER089C	PHO81	P17442	1178 aa		13.18	□□□□□ -0.3
PTC2	YER089C	URA4	P20051	364 aa		13.18	□□□□□ -0.3
PTC2	YER089C	KIN3	P22209	435 aa		13.18	□□□□□ -0.3
PTC2	YER089C	UBA1	P22515	1024 aa	Known RBP	13.18	□□□□□ -0.3
PTC2	YER089C	SPS19	P32573	292 aa	Known RBP	13.18	□□□□□ -0.3
PTC2	YER089C	COX13	P32799	129 aa		13.18	□□□□□ -0.3
PTC2	YER089C	FTH1	P38310	465 aa		13.18	□□□□□ -0.3
PTC2	YER089C	IRR1	P40541	1150 aa		13.18	□□□□□ -0.3
PTC2	YER089C	IMA5	P40884	581 aa		13.18	□□□□□ -0.3
PTC2	YER089C	REF2	P42073	533 aa	Predicted RBP	13.18	□□□□□ -0.3
PTC2	YER089C	GLG2	P47011	380 aa		13.18	□□□□□ -0.3
PTC2	YER089C	MPS3	P47069	682 aa		13.18	□□□□□ -0.3
PTC2	YER089C	NOP9	P47077	666 aa	Known RBP	13.18	□□□□□ -0.3
PTC2	YER089C	FRE4	P53746	719 aa		13.18	□□□□□ -0.3
PTC2	YER089C	CIA1	Q05583	330 aa		13.18	□□□□□ -0.3
PTC2	YER089C	MUM3	Q08750	479 aa		13.18	□□□□□ -0.3
PTC2	YER089C	BUD7	Q08754	746 aa		13.18	□□□□□ -0.3
PTC2	YER089C	TUB1	P09733	447 aa	Known RBP	13.17	□□□□□ -0.3
PTC2	YER089C	APA1	P16550	321 aa	Known RBP	13.17	□□□□□ -0.3
PTC2	YER089C	CCA1	P21269	546 aa		13.17	□□□□□ -0.3
PTC2	YER089C	SIR1	P21691	654 aa		13.17	□□□□□ -0.3
PTC2	YER089C	COQ8	P27697	501 aa		13.17	□□□□□ -0.3
PTC2	YER089C	CAF4	P36130	643 aa		13.17	□□□□□ -0.3
PTC2	YER089C	IST2	P38250	946 aa		13.17	□□□□□ -0.3
PTC2	YER089C	LRP1	P38801	184 aa	Known RBP	13.17	□□□□□ -0.3
PTC2	YER089C	ARB1	P40024	610 aa	Known RBP	13.17	□□□□□ -0.3
PTC2	YER089C	ERG10	P41338	398 aa	Known RBP	13.17	□□□□□ -0.3
PTC2	YER089C	GCD10	P41814	478 aa		13.17	□□□□□ -0.3
PTC2	YER089C	GAT1	P43574	510 aa		13.17	□□□□□ -0.3
PTC2	YER089C	MTR3	P48240	250 aa	Predicted RBP	13.17	□□□□□ -0.3
PTC2	YER089C	DIA3	P52290	468 aa		13.17	□□□□□ -0.3
PTC2	YER089C	VEL1	P53058	206 aa		13.17	□□□□□ -0.3
PTC2	YER089C	GET1	P53192	235 aa		13.17	□□□□□ -0.3
PTC2	YER089C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	13.17	□□□□□ -0.3	RIP-Chip
PTC2	YER089C	PPN1	Q04119	674 aa		13.17	□□□□□ -0.3
PTC2	YER089C	RSB1	Q08417	382 aa		13.17	□□□□□ -0.3
PTC2	YER089C	HUA2	Q12134	243 aa		13.17	□□□□□ -0.3
PTC2	YER089C	MCD1	Q12158	566 aa		13.17	□□□□□ -0.3
PTC2	YER089C	GTT2	Q12390	233 aa		13.17	□□□□□ -0.3
PTC2	YER089C	SEC39	Q12745	709 aa		13.17	□□□□□ -0.3
PTC2	YER089C	YCK2	P23292	546 aa	Known RBP	13.16	□□□□□ -0.3
PTC2	YER089C	BRF1	P29056	596 aa		13.16	□□□□□ -0.3
PTC2	YER089C	SWE1	P32944	819 aa		13.16	□□□□□ -0.3
PTC2	YER089C	YKL100C	P34248	587 aa		13.16	□□□□□ -0.3
PTC2	YER089C	YKR078W	P36158	585 aa	Known RBP	13.16	□□□□□ -0.3
PTC2	YER089C	CYC2	P38909	366 aa		13.16	□□□□□ -0.3
PTC2	YER089C	GIP4	P39732	760 aa		13.16	□□□□□ -0.3
PTC2	YER089C	YER034W	P40022	185 aa	Known RBP	13.16	□□□□□ -0.3
PTC2	YER089C	GVP36	P40531	326 aa	Known RBP	13.16	□□□□□ -0.3
PTC2	YER089C	PYK2	P52489	506 aa	Known RBP	13.16	□□□□□ -0.3
PTC2	YER089C	YMR111C	Q04461	462 aa	Predicted RBP	13.16	□□□□□ -0.3
PTC2	YER089C	TMN2	Q04562	672 aa		13.16	□□□□□ -0.3
PTC2	YER089C	SEM1	O94742	89 aa		13.15	□□□□□ -0.3
PTC2	YER089C	STE14	P32584	239 aa		13.15	□□□□□ -0.3
PTC2	YER089C	PXA2	P34230	853 aa		13.15	□□□□□ -0.3
PTC2	YER089C	HSE1	P38753	452 aa		13.15	□□□□□ -0.3
PTC2	YER089C	TIM17	P39515	158 aa		13.15	□□□□□ -0.3
PTC2	YER089C	EMC4	P53073	190 aa		13.15	□□□□□ -0.3
PTC2	YER089C	FLC3	P53121	802 aa		13.15	□□□□□ -0.3
PTC2	YER089C	NAN1	Q02931	896 aa	Known RBP	13.15	□□□□□ -0.3
PTC2	YER089C	YMR178W	Q03219	274 aa	Known RBP	13.15	□□□□□ -0.3
PTC2	YER089C	UBR1	P19812	1950 aa		13.15	□□□□□ -0.31
PTC2	YER089C	STE6	P12866	1290 aa		13.14	□□□□□ -0.31
PTC2	YER089C	CIN8	P27895	1000 aa		13.14	□□□□□ -0.31
PTC2	YER089C	YHR020W	P38708	688 aa	Known RBP	13.14	□□□□□ -0.31
PTC2	YER089C	PCL5	P38794	229 aa		13.14	□□□□□ -0.31
PTC2	YER089C	NPT1	P39683	429 aa	Known RBP	13.14	□□□□□ -0.31
PTC2	YER089C	RMD8	P43620	662 aa		13.14	□□□□□ -0.31
PTC2	YER089C	ARI1	P53111	347 aa	Known RBP	13.14	□□□□□ -0.31
PTC2	YER089C	EAR1	Q03212	550 aa		13.14	□□□□□ -0.31
PTC2	YER089C	SLF1	Q12034	447 aa	Known RBP	13.14	□□□□□ -0.31
PTC2	YER089C	PHO5	P00635	467 aa		13.13	□□□□□ -0.31
PTC2	YER089C	HXK2	P04807	486 aa	Known RBP	13.13	□□□□□ -0.31
PTC2	YER089C	KEX2	P13134	814 aa		13.13	□□□□□ -0.31
PTC2	YER089C	RSR1	P13856	272 aa		13.13	□□□□□ -0.31
PTC2	YER089C	DBP8	P38719	431 aa		13.13	□□□□□ -0.31
PTC2	YER089C	BEM4	P39011	633 aa		13.13	□□□□□ -0.31
PTC2	YER089C	DOT6	P40059	670 aa	Known RBP	13.13	□□□□□ -0.31
PTC2	YER089C	SEC26	P41810	973 aa	Known RBP	13.13	□□□□□ -0.31
PTC2	YER089C	SEC27	P41811	889 aa	Known RBP	13.13	□□□□□ -0.31
PTC2	YER089C	YPT32	P51996	222 aa	Known RBP	13.13	□□□□□ -0.31
PTC2	YER089C	ECM9	Q02202	377 aa		13.13	□□□□□ -0.31
PTC2	YER089C	MMT1	Q03218	510 aa		13.13	□□□□□ -0.31
PTC2	YER089C	BCH1	Q05029	724 aa		13.13	□□□□□ -0.31
PTC2	YER089C	HBT1	Q07653	1046 aa	Known RBP	13.13	□□□□□ -0.31
PTC2	YER089C	FLC1	Q08967	793 aa		13.13	□□□□□ -0.31
PTC2	YER089C	SUC2	P00724	532 aa		13.12	□□□□□ -0.31
PTC2	YER089C	YAR066W	P0CX18	203 aa		13.12	□□□□□ -0.31
PTC2	YER089C	YHR214W	P0CX19	203 aa		13.12	□□□□□ -0.31
PTC2	YER089C	OCA4	P25366	362 aa		13.12	□□□□□ -0.31
PTC2	YER089C	SGF29	P25554	259 aa		13.12	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms