RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	YMR178W	Q03219	274 aa	Known RBP	4.62	□□□□□ -1.67
TRP4	YDR354W	YDR415C	Q04033	374 aa	Predicted RBP	4.62	□□□□□ -1.67
TRP4	YDR354W	SNO4	Q04902	237 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	PSR2	Q07949	397 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	HSP33	Q08914	237 aa	Known RBP	4.62	□□□□□ -1.67
TRP4	YDR354W	HSP32	Q08992	237 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	ALY1	P36117	915 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	KTR3	P38130	404 aa	Predicted RBP	4.61	□□□□□ -1.67
TRP4	YDR354W	ARP1	P38696	384 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	YER010C	P40011	234 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	FMP10	P40098	244 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	PKP2	P53170	491 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	RSF1	Q05043	376 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	ADE13	Q05911	482 aa	Known RBP	4.61	□□□□□ -1.67
TRP4	YDR354W	YLR352W	Q06479	807 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	YOR111W	Q99210	232 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	SEC7	P11075	2009 aa	Known RBP	4.61	□□□□□ -1.67
TRP4	YDR354W	VMR1	P38735	1592 aa		4.61	□□□□□ -1.67
TRP4	YDR354W	LCB1	P25045	558 aa	Known RBP	4.6	□□□□□ -1.67
TRP4	YDR354W	GAC1	P28006	793 aa		4.6	□□□□□ -1.67
TRP4	YDR354W	RPN2	P32565	945 aa	Known RBP	4.6	□□□□□ -1.67
TRP4	YDR354W	TRS65	P32893	560 aa		4.6	□□□□□ -1.67
TRP4	YDR354W	MIA40	P36046	403 aa		4.6	□□□□□ -1.67
TRP4	YDR354W	FMP46	P36141	133 aa	Known RBP	4.6	□□□□□ -1.67
TRP4	YDR354W	PIL1	P53252	339 aa	Known RBP	4.6	□□□□□ -1.67
TRP4	YDR354W	MUB1	Q03162	620 aa		4.6	□□□□□ -1.67
TRP4	YDR354W	RCO1	Q04779	684 aa		4.6	□□□□□ -1.67
TRP4	YDR354W	INP53	Q12271	1107 aa		4.6	□□□□□ -1.67
TRP4	YDR354W	IQG1	Q12280	1495 aa		4.6	□□□□□ -1.67
TRP4	YDR354W	NUP192	P47054	1683 aa		4.6	□□□□□ -1.67
TRP4	YDR354W	GID7	P25569	745 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	ANS1	P38832	159 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	BUR6	P40096	142 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	AZF1	P41696	914 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	SMC3	P47037	1230 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	STR3	P53101	465 aa	Known RBP	4.59	□□□□□ -1.67
TRP4	YDR354W	NUP100	Q02629	959 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	YTH1	Q06102	208 aa	Predicted RBP	4.59	□□□□□ -1.67
TRP4	YDR354W	ATG26	Q06321	1198 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	YLR419W	Q06698	1435 aa	Known RBP	4.59	□□□□□ -1.67
TRP4	YDR354W	APL4	Q12028	832 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	TIP41	Q12199	356 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	YMR230W-A	Q3E7B5	62 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	YOL087C	Q99247	1116 aa		4.59	□□□□□ -1.67
TRP4	YDR354W	SRB8	P25648	1427 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	SPT7	P35177	1332 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	PGS1	P25578	521 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	SNU114	P36048	1008 aa	Known RBP	4.58	□□□□□ -1.68
TRP4	YDR354W	VPS24	P36095	224 aa	Known RBP	4.58	□□□□□ -1.68
TRP4	YDR354W	FUI1	P38196	639 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	PHO90	P39535	881 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	SLZ1	P40167	298 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	CUL3	P53202	744 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	INN1	P53901	409 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	VMS1	Q04311	632 aa	Known RBP	4.58	□□□□□ -1.68
TRP4	YDR354W	SKG3	Q06315	1026 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	CSR2	Q12734	1121 aa		4.58	□□□□□ -1.68
TRP4	YDR354W	PHO2	P07269	559 aa		4.57	□□□□□ -1.68
TRP4	YDR354W	GLN3	P18494	730 aa		4.57	□□□□□ -1.68
TRP4	YDR354W	YKL050C	P35736	922 aa		4.57	□□□□□ -1.68
TRP4	YDR354W	ERG7	P38604	731 aa		4.57	□□□□□ -1.68
TRP4	YDR354W	YIR014W	P40570	242 aa		4.57	□□□□□ -1.68
TRP4	YDR354W	YFR016C	P43597	1233 aa	Known RBP	4.57	□□□□□ -1.68
TRP4	YDR354W	RPS7B	P48164	190 aa	Known RBP	4.57	□□□□□ -1.68
TRP4	YDR354W	PWP2	P25635	923 aa	Known RBP	4.56	□□□□□ -1.68
TRP4	YDR354W	UIP3	P39547	235 aa		4.56	□□□□□ -1.68
TRP4	YDR354W	KAP123	P40069	1113 aa	Known RBP	4.56	□□□□□ -1.68
TRP4	YDR354W	SOL4	P53315	255 aa		4.56	□□□□□ -1.68
TRP4	YDR354W	INA17	Q02888	182 aa		4.56	□□□□□ -1.68
TRP4	YDR354W	RDR1	Q08904	546 aa		4.56	□□□□□ -1.68
TRP4	YDR354W	DNF2	Q12675	1612 aa		4.56	□□□□□ -1.68
TRP4	YDR354W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.55	□□□□□ -1.68
TRP4	YDR354W	NUP188	P52593	1655 aa	Known RBP	4.55	□□□□□ -1.68
TRP4	YDR354W	CBF2	P32504	956 aa		4.55	□□□□□ -1.68
TRP4	YDR354W	RIM2	P38127	377 aa		4.55	□□□□□ -1.68
TRP4	YDR354W	DIA4	P38705	446 aa	Predicted RBP	4.55	□□□□□ -1.68
TRP4	YDR354W	YML131W	Q03102	365 aa		4.55	□□□□□ -1.68
TRP4	YDR354W	USO1	P25386	1790 aa		4.55	□□□□□ -1.68
TRP4	YDR354W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.55	□□□□□ -1.68
TRP4	YDR354W	SNF3	P10870	884 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	SPE2	P21182	396 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	UBA4	P38820	440 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	RGI2	P40188	164 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	YJL070C	P40361	888 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	RPS0B	P46654	252 aa	Known RBP	4.54	□□□□□ -1.68
TRP4	YDR354W	CBK1	P53894	756 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	ZDS2	P54786	942 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	EMI2	Q04409	500 aa	Known RBP	4.54	□□□□□ -1.68
TRP4	YDR354W	ENT4	Q07872	247 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	NBP2	Q12163	236 aa		4.54	□□□□□ -1.68
TRP4	YDR354W	SNF2	P22082	1703 aa		4.53	□□□□□ -1.68
TRP4	YDR354W	MCM4	P30665	933 aa	Known RBP	4.53	□□□□□ -1.68
TRP4	YDR354W	TOA1	P32773	286 aa		4.53	□□□□□ -1.68
TRP4	YDR354W	RRN3	P36070	627 aa		4.53	□□□□□ -1.68
TRP4	YDR354W	YJR061W	P40355	935 aa		4.53	□□□□□ -1.68
TRP4	YDR354W	AAD10	P47182	288 aa		4.53	□□□□□ -1.68
TRP4	YDR354W	CRZ1	P53968	678 aa		4.53	□□□□□ -1.68
TRP4	YDR354W	TMA64	Q04600	565 aa	Known RBP	4.53	□□□□□ -1.68
TRP4	YDR354W	PSR1	Q07800	427 aa		4.53	□□□□□ -1.68
TRP4	YDR354W	RPS10A	Q08745	105 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms