RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 CYP2C8P10632 490 aa13.77□□□□□ -0.21
VPS45-212ENST00000611412 IRX3P78415 501 aaPredicted RBP13.77□□□□□ -0.21
VPS45-212ENST00000611412 IFFO2Q5TF58 517 aa13.77□□□□□ -0.21
VPS45-212ENST00000611412 FAM43AQ8N2R8 423 aa13.77□□□□□ -0.21
VPS45-212ENST00000611412 WASF1Q92558 559 aa13.77□□□□□ -0.21
VPS45-212ENST00000611412 RANBP17Q9H2T7 1088 aaKnown RBP13.77□□□□□ -0.21
VPS45-212ENST00000611412 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.21
VPS45-212ENST00000611412 SPDYE16A6NNV3 312 aaPredicted RBP13.76□□□□□ -0.21
VPS45-212ENST00000611412 STXBP3O00186 592 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 PDHXO00330 501 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 ADAMTS3O15072 1205 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 STX6O43752 255 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 AOC2O75106 756 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 DEFB115Q30KQ5 88 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 KRT40Q6A162 431 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 KIF3AQ9Y496 699 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 CTDP1Q9Y5B0 961 aaPredicted RBP13.76□□□□□ -0.21
VPS45-212ENST00000611412 PARP14Q460N5 1801 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 RLFQ13129 1914 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 VWA5AO00534 786 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 HOXA7P31268 230 aaPredicted RBP13.76□□□□□ -0.21
VPS45-212ENST00000611412 NAPAP54920 295 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 TRIM29Q14134 588 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 POTEEQ6S8J3 1075 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 FERMT3Q86UX7 667 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 FBXO11Q86XK2 927 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 SLC38A10Q9HBR0 1119 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
VPS45-212ENST00000611412 MTMR6Q9Y217 621 aa13.76□□□□□ -0.21
VPS45-212ENST00000611412 ZNF536O15090 1300 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 IGF2BP3O00425 579 aaKnown RBP eCLIP13.75□□□□□ -0.21
VPS45-212ENST00000611412 ZBED4O75132 1171 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 OSBPP22059 807 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 MCTP1Q6DN14 999 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 FBXO18Q8NFZ0 1043 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 PAGR1Q9BTK6 254 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 BARHL2Q9NY43 387 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 HOXC10Q9NYD6 342 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 ZDHHC9Q9Y397 364 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 PCDHA1Q9Y5I3 950 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 PDCP20941 246 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 NLRP5P59047 1200 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 HERVK_113P62684 666 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 KIF23Q02241 960 aaPredicted RBP13.75□□□□□ -0.21
VPS45-212ENST00000611412 PABPC4Q13310 644 aaKnown RBP eCLIP13.75□□□□□ -0.21
VPS45-212ENST00000611412 PLS1Q14651 629 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 TMEM132BQ14DG7 1078 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 FOXD4L6Q3SYB3 417 aaPredicted RBP13.75□□□□□ -0.21
VPS45-212ENST00000611412 FOXD4L3Q6VB84 417 aaPredicted RBP13.75□□□□□ -0.21
VPS45-212ENST00000611412 HHIPL1Q96JK4 782 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 CAPNS2Q96L46 248 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 AMNQ9BXJ7 453 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 HOMER2Q9NSB8 354 aa13.75□□□□□ -0.21
VPS45-212ENST00000611412 COL11A1P12107 1806 aaPredicted RBP13.74□□□□□ -0.21
VPS45-212ENST00000611412 MANSC4A6NHS7 340 aaPredicted RBP13.74□□□□□ -0.21
VPS45-212ENST00000611412 RASSF10A6NK89 507 aa13.74□□□□□ -0.21
VPS45-212ENST00000611412 ANKRD23Q86SG2 305 aa13.74□□□□□ -0.21
VPS45-212ENST00000611412 REPS2Q8NFH8 660 aa13.74□□□□□ -0.21
VPS45-212ENST00000611412 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
VPS45-212ENST00000611412 CHMP5Q9NZZ3 219 aa13.74□□□□□ -0.21
VPS45-212ENST00000611412 BTBD7Q9P203 1132 aa13.74□□□□□ -0.21
VPS45-212ENST00000611412 CCPG1Q9ULG6 757 aa13.74□□□□□ -0.21
VPS45-212ENST00000611412 SMCHD1A6NHR9 2005 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 SMCO2A6NFE2 343 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 ALAS1P13196 640 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 XBP1P17861 261 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 PHF20Q9BVI0 1012 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 ADAMTS5Q9UNA0 930 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
VPS45-212ENST00000611412 KIF28PB7ZC32 967 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 MMP1P03956 469 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 ICAM1P05362 532 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 RASGRP4Q8TDF6 673 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 SMCR8Q8TEV9 937 aaPredicted RBP13.73□□□□□ -0.21
VPS45-212ENST00000611412 CHAMP1Q96JM3 812 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 TXNRD2Q9NNW7 524 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 RIPK3Q9Y572 518 aa13.73□□□□□ -0.21
VPS45-212ENST00000611412 BTBD18B2RXH4 712 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 CNMDO75829 334 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 BRD1O95696 1058 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 ZSCAN22P10073 491 aaPredicted RBP13.72□□□□□ -0.21
VPS45-212ENST00000611412 NR5A1Q13285 461 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 NPY5RQ15761 445 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 NOM1Q5C9Z4 860 aaKnown RBP13.72□□□□□ -0.21
VPS45-212ENST00000611412 SNRNP48Q6IEG0 339 aaKnown RBP13.72□□□□□ -0.21
VPS45-212ENST00000611412 FAM173BQ6P4H8 233 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 LBX2Q6XYB7 198 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 DIS3L2Q8IYB7 885 aaKnown RBP13.72□□□□□ -0.21
VPS45-212ENST00000611412 PNMA3Q9UL41 463 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 ZNF214Q9UL59 606 aaPredicted RBP13.72□□□□□ -0.21
VPS45-212ENST00000611412 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
VPS45-212ENST00000611412 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
VPS45-212ENST00000611412 ECM2O94769 699 aaPredicted RBP13.71□□□□□ -0.21
VPS45-212ENST00000611412 GNL2Q13823 731 aaKnown RBP13.71□□□□□ -0.21
VPS45-212ENST00000611412 UBE2SQ16763 222 aa13.71□□□□□ -0.21
VPS45-212ENST00000611412 MUM1L1Q5H9M0 696 aa13.71□□□□□ -0.21
VPS45-212ENST00000611412 IFNL1Q8IU54 200 aa13.71□□□□□ -0.21
VPS45-212ENST00000611412 CCDC148Q8NFR7 591 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 440.3 ms